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[ Saccharomyces cerevisiae S288C ]

Gene ID: 853411, updated on 3-May-2025
Primary source
SGD:S000006538
Locus tag
YNCJ0013C
See related
AllianceGenome:SGD:S000006538
Gene type
tRNA
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Predicted to enable triplet codon-amino acid adaptor activity. Predicted to be involved in translational elongation. Predicted to act upstream of or within translation. Predicted to be located in cytosol. [provided by Alliance of Genome Resources, May 2025]
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Location:
chromosome: X
Sequence:
Chromosome: X; NC_001142.9 (374424..374495, complement)

Chromosome X - NC_001142.9Genomic Context describing neighboring genes Neighboring gene FG-nucleoporin NSP1 Neighboring gene Nup192p Neighboring gene tRNA-Arg Neighboring gene Loh1p

Genomic Sequence:
NC_001142.9

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Yeast tRNA(Asp) charging accuracy is threatened by the N-terminal extension of aspartyl-tRNA synthetase. Ryckelynck M, et al. J Biol Chem, 2003 Mar 14. PMID 12486031
  2. Arginine aminoacylation identity is context-dependent and ensured by alternate recognition sets in the anticodon loop of accepting tRNA transcripts. Sissler M, et al. EMBO J, 1996 Sep 16. PMID 8890180, Free PMC Article
  3. tRNA genes and retroelements in the yeast genome. Hani J, et al. Nucleic Acids Res, 1998 Feb 1. PMID 9443958, Free PMC Article
  4. Transfer RNA gene redundancy and translational selection in Saccharomyces cerevisiae. Percudani R, et al. J Mol Biol, 1997 May 2. PMID 9159473
  5. A unique nucleosome arrangement, maintained actively by chromatin remodelers facilitates transcription of yeast tRNA genes. Kumar Y, et al. BMC Genomics, 2013 Jun 17. PMID 23767421, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

Products Interactant Other Gene Complex Source Pubs Description
  • Aspartate tRNA (tRNA-Asp), predicted by tRNAscan-SE analysis

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables triplet codon-amino acid adaptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables triplet codon-amino acid adaptor activity ISM
Inferred from Sequence Model
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within translation IEA
Inferred from Electronic Annotation
more info
  
involved_in translational elongation IC
Inferred by Curator
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IC
Inferred by Curator
more info
 PubMed 

Gene LinkOut

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