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CHS6 Chs6p [ Saccharomyces cerevisiae S288C ]

Gene ID: 853346, updated on 4-Aug-2021

Summary

Gene symbol
CHS6
Gene description
Chs6p
Primary source
SGD:S000003635
Locus tag
YJL099W
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Also known as
CSD3
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Genomic context

See CHS6 in Genome Data Viewer
Location:
chromosome: X
Exon count:
1
Sequence:
Chromosome: X; NC_001142.9 (239414..241654)

Chromosome X - NC_001142.9Genomic Context describing neighboring genes Neighboring gene glutamate--cysteine ligase Neighboring gene 1-phosphatidylinositol 4-kinase LSB6 Neighboring gene Sap185p Neighboring gene enoyl-CoA hydratase PHS1

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

Gene Ontology Provided by GO

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in Golgi to plasma membrane transport IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in Golgi to plasma membrane transport IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in Golgi to plasma membrane transport IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in fungal-type cell wall chitin biosynthetic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in protein transport IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 
colocalizes_with clathrin-coated vesicle HDA PubMed 
located_in cytosol HDA PubMed 
part_of exomer complex IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
part_of exomer complex IDA
Inferred from Direct Assay
more info
PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
colocalizes_with trans-Golgi network transport vesicle IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
Chs6p
NP_012436.1
  • Member of the ChAPs (Chs5p-Arf1p-binding proteins) family; part of the exomer complex that mediates export of specific cargo proteins, including Chs3p, from the Golgi to the plasma membrane; primary component of the Chs5/6 complex that binds directly to membranes; CHS6 has a paralog, BCH2, that arose from the whole genome duplication

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001142.9 Reference assembly

    Range
    239414..241654
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001181532.1NP_012436.1  TPA: Chs6p [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_012436.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P40955
    Conserved Domains (1) summary
    pfam09295
    Location:89558
    ChAPs; ChAPs (Chs5p-Arf1p-binding proteins)
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