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CLD1 [ Saccharomyces cerevisiae S288C ]

Gene ID: 853007, updated on 11-Sep-2024

Summary

Official Symbol
CLD1
Primary source
SGD:S000003342
Locus tag
YGR110W
See related
AllianceGenome:SGD:S000003342; FungiDB:YGR110W; VEuPathDB:YGR110W
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Enables phospholipase A2 activity. Involved in cardiolipin acyl-chain remodeling. Located in mitochondrial inner membrane. Human ortholog(s) of this gene implicated in autosomal recessive congenital ichthyosis 1 and neutral lipid storage disease. Orthologous to human ABHD4 (abhydrolase domain containing 4, N-acyl phospholipase B) and ABHD5 (abhydrolase domain containing 5, lysophosphatidic acid acyltransferase). [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

Location:
chromosome: VII
Exon count:
1
Sequence:
Chromosome: VII; NC_001139.9 (713709..715046)

Chromosome VII - NC_001139.9Genomic Context describing neighboring genes Neighboring gene tRNA-Cys Neighboring gene gag protein Neighboring gene gag-pol fusion protein Neighboring gene uncharacterized protein Neighboring gene Shy1p

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
 
enables lysophosphatidic acid acyltransferase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables phospholipase A2 activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables phospholipase A2 activity IDA
Inferred from Direct Assay
more info
PubMed 
enables phospholipase A2 activity IMP
Inferred from Mutant Phenotype
more info
PubMed 
enables transferase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in cardiolipin acyl-chain remodeling IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in cardiolipin acyl-chain remodeling IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in cardiolipin metabolic process IDA
Inferred from Direct Assay
more info
PubMed 
involved_in cardiolipin metabolic process IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in lipid homeostasis IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in phosphatidic acid biosynthetic process IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
is_active_in mitochondrial inner membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in mitochondrial inner membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in mitochondrial inner membrane IEA
Inferred from Electronic Annotation
more info
 
is_active_in mitochondrion IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in mitochondrion IDA
Inferred from Direct Assay
more info
PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
carboxylic ester hydrolase
NP_011625.3
  • Mitochondrial cardiolipin-specific phospholipase; functions upstream of Taz1p to generate monolyso-cardiolipin; transcription increases upon genotoxic stress; involved in restricting Ty1 transposition; has homology to mammalian CGI-58

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001139.9 Reference assembly

    Range
    713709..715046
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001181239.3NP_011625.3  TPA: carboxylic ester hydrolase [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_011625.3

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6VUP3, P53264
    UniProtKB/TrEMBL
    A6ZUC5, B3LIB7, B5VJ55, C7GPS2, C8Z902, N1P9W4
    Conserved Domains (1) summary
    PLN02894
    Location:103439
    PLN02894; hydrolase, alpha/beta fold family protein