U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

TRP5 tryptophan synthase TRP5 [ Saccharomyces cerevisiae S288C ]

Gene ID: 852858, updated on 18-Jan-2023

Summary

Gene symbol
TRP5
Gene description
tryptophan synthase TRP5
Primary source
SGD:S000002994
Locus tag
YGL026C
See related
AllianceGenome:SGD:S000002994
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Enables tryptophan synthase activity. Involved in tryptophan biosynthetic process. Located in cytoplasm and nucleus. [provided by Alliance of Genome Resources, Apr 2022]
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See TRP5 in Genome Data Viewer
Location:
chromosome: VII
Exon count:
1
Sequence:
Chromosome: VII; NC_001139.9 (446412..448535, complement)

Chromosome VII - NC_001139.9Genomic Context describing neighboring genes Neighboring gene putative glucan endo-1,3-beta-D-glucosidase Neighboring gene mannosyl-oligosaccharide glucosidase Neighboring gene Pgd1p Neighboring gene Pib2p

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

Gene Ontology Provided by GO

Function Evidence Code Pubs
enables lyase activity IEA
Inferred from Electronic Annotation
more info
 
enables tryptophan synthase activity IDA
Inferred from Direct Assay
more info
PubMed 
enables tryptophan synthase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in amino acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 
involved_in aromatic amino acid family biosynthetic process IEA
Inferred from Electronic Annotation
more info
 
involved_in tryptophan biosynthetic process IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in tryptophan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 
involved_in tryptophan biosynthetic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in tryptophan metabolic process IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in cytoplasm HDA PubMed 
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in nucleus HDA PubMed 

General protein information

Preferred Names
tryptophan synthase TRP5
NP_011489.1
  • Tryptophan synthase; catalyzes the last step of tryptophan biosynthesis; regulated by the general control system of amino acid biosynthesis

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001139.9 Reference assembly

    Range
    446412..448535 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001180891.1NP_011489.1  TPA: tryptophan synthase TRP5 [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_011489.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6VUB2, P00931
    UniProtKB/TrEMBL
    A0A8H4FBM2, N1P5K3
    Conserved Domains (2) summary
    PRK04346
    Location:305688
    PRK04346; tryptophan synthase subunit beta; Validated
    pfam00290
    Location:9259
    Trp_syntA; Tryptophan synthase alpha chain