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TAF6 Taf6p [ Saccharomyces cerevisiae S288C ]

Gene ID: 852766, updated on 6-Aug-2017
Gene symbol
TAF6
Gene description
Taf6p
Primary source
SGD:S000003080
Locus tag
YGL112C
Gene type
protein coding
RNA name
Taf6p
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288c)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Also known as
TAF60
See TAF6 in Map Viewer
Location:
chromosome: VII
Exon count:
1
Sequence:
Chromosome: VII; NC_001139.9 (298178..299728, complement)

Chromosome VII - NC_001139.9Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene Sld3p Neighboring gene ribosome biosynthesis protein NSA1 Neighboring gene Cue3p

Products Interactant Other Gene Complex Source Pubs Description

Homology

Gene Ontology Provided by GO

Process Evidence Code Pubs
DNA-templated transcription, initiation IEA
Inferred from Electronic Annotation
more info
 
RNA polymerase II transcriptional preinitiation complex assembly IMP
Inferred from Mutant Phenotype
more info
PubMed 
chromatin organization IDA
Inferred from Direct Assay
more info
PubMed 
histone acetylation IDA
Inferred from Direct Assay
more info
PubMed 
regulation of sequence-specific DNA binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 
regulation of transcription, DNA-templated IEA
Inferred from Electronic Annotation
more info
 
transcription from RNA polymerase II promoter IDA
Inferred from Direct Assay
more info
PubMed 
transcription, DNA-templated IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
SAGA complex IDA
Inferred from Direct Assay
more info
PubMed 
SLIK (SAGA-like) complex IDA
Inferred from Direct Assay
more info
PubMed 
cytosol IDA
Inferred from Direct Assay
more info
PubMed 
nucleus IDA
Inferred from Direct Assay
more info
PubMed 
nucleus IEA
Inferred from Electronic Annotation
more info
 
transcription factor TFIID complex IDA
Inferred from Direct Assay
more info
PubMed 
Names
Taf6p
NP_011403.1
  • Subunit (60 kDa) of TFIID and SAGA complexes; involved in transcription initiation of RNA polymerase II and in chromatin modification, similar to histone H4; relocalizes to the cytosol in response to hypoxia

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001139.9 Reference assembly

    Range
    298178..299728 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001180977.1NP_011403.1  TPA: Taf6p [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_011403.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P53040
    Conserved Domains (2) summary
    cd08050
    Location:13405
    TAF6; TATA Binding Protein (TBP) Associated Factor 6 (TAF6) is one of several TAFs that bind TBP and is involved in forming Transcription Factor IID (TFIID) complex
    COG5095
    Location:6513
    TAF6; Transcription initiation factor TFIID, subunit TAF6 (also component of histone acetyltransferase SAGA) [Transcription]
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