Format

Send to:

Choose Destination

RAD54 DNA-dependent ATPase RAD54 [ Saccharomyces cerevisiae S288C ]

Gene ID: 852713, updated on 22-Aug-2021

Summary

Gene symbol
RAD54
Gene description
DNA-dependent ATPase RAD54
Primary source
SGD:S000003131
Locus tag
YGL163C
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Also known as
XRS1
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See RAD54 in Genome Data Viewer
Location:
chromosome: VII
Exon count:
1
Sequence:
Chromosome: VII; NC_001139.9 (193707..196403, complement)

Chromosome VII - NC_001139.9Genomic Context describing neighboring genes Neighboring gene Cup2p Neighboring gene Yrb30p Neighboring gene Sut1p Neighboring gene Yip5p

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

  • Homologs of the RAD54 gene: The RAD54 gene is conserved in human, chimpanzee, dog, cow, mouse, rat, chicken, zebrafish, fruit fly, mosquito, C.elegans, S.cerevisiae, K.lactis, E.gossypii, S.pombe, M.oryzae, N.crassa, A.thaliana, rice, and frog.

Gene Ontology Provided by GO

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 
enables ATP-dependent activity, acting on DNA IDA
Inferred from Direct Assay
more info
PubMed 
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 
enables DNA helicase activity IEA
Inferred from Electronic Annotation
more info
 
enables DNA translocase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables DNA translocase activity IDA
Inferred from Direct Assay
more info
PubMed 
enables helicase activity IEA
Inferred from Electronic Annotation
more info
 
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
 
enables hydrolase activity, acting on acid anhydrides IEA
Inferred from Electronic Annotation
more info
 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
enables nucleotide binding IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in cytoplasm HDA PubMed 
located_in nucleus HDA PubMed 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 
located_in nucleus IMP
Inferred from Mutant Phenotype
more info
PubMed 

General protein information

Preferred Names
DNA-dependent ATPase RAD54
NP_011352.1
  • DNA-dependent ATPase that stimulates strand exchange; modifies the topology of double-stranded DNA; involved in the recombinational repair of double-strand breaks in DNA during vegetative growth and meiosis; member of the SWI/SNF family of DNA translocases; forms nuclear foci upon DNA replication stress

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001139.9 Reference assembly

    Range
    193707..196403 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001181028.1NP_011352.1  TPA: DNA-dependent ATPase RAD54 [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_011352.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P32863
    Conserved Domains (3) summary
    COG0553
    Location:148827
    HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
    cd18067
    Location:271554
    DEXHc_RAD54A; DEXH-box helicase domain of RAD54A
    pfam08658
    Location:29246
    Rad54_N; Rad54 N terminal
Support Center