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REI1 Rei1p [ Saccharomyces cerevisiae S288C ]

Gene ID: 852569, updated on 18-Jan-2023

Summary

Gene symbol
REI1
Gene description
Rei1p
Primary source
SGD:S000000471
Locus tag
YBR267W
See related
AllianceGenome:SGD:S000000471
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Enables sequence-specific DNA binding activity. Involved in several processes, including budding cell bud growth; nucleocytoplasmic transport; and ribosomal large subunit biogenesis. Located in cytoplasm. Part of preribosome, large subunit precursor. Orthologous to human ZNF622 (zinc finger protein 622). [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

See REI1 in Genome Data Viewer
Location:
chromosome: II
Exon count:
1
Sequence:
Chromosome: II; NC_001134.8 (739841..741022)

Chromosome II - NC_001134.8Genomic Context describing neighboring genes Neighboring gene Rab family GTPase YPT10 Neighboring gene 3-dehydrosphinganine reductase Neighboring gene Slm6p Neighboring gene mitochondrial 54S ribosomal protein YmL37 Neighboring gene Sdh8p

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

Gene Ontology Provided by GO

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 
enables sequence-specific DNA binding HDA PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 
enables zinc ion binding RCA
inferred from Reviewed Computational Analysis
more info
PubMed 
Process Evidence Code Pubs
involved_in budding cell bud growth IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in mitotic cell cycle IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in nucleocytoplasmic transport IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in ribonucleoprotein complex biogenesis IEA
Inferred from Electronic Annotation
more info
 
involved_in ribosomal large subunit biogenesis IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in ribosomal large subunit biogenesis IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in ribosomal large subunit biogenesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in ribosome biogenesis IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in cytoplasm HDA PubMed 
located_in cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
part_of preribosome, large subunit precursor IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
part_of preribosome, large subunit precursor IDA
Inferred from Direct Assay
more info
PubMed 
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
Rei1p
NP_009825.4
  • Cytoplasmic pre-60S factor; required for the correct recycling of shuttling factors Alb1, Arx1 and Tif6 at the end of the ribosomal large subunit biogenesis; involved in bud growth in the mitotic signaling network

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001134.8 Reference assembly

    Range
    739841..741022
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001178615.4NP_009825.4  TPA: Rei1p [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_009825.4

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6VQR3, P38344
    UniProtKB/TrEMBL
    A0A8H4BTF6, N1P9N0
    Conserved Domains (3) summary
    PTZ00448
    Location:950
    PTZ00448; hypothetical protein; Provisional
    sd00020
    Location:931
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam12756
    Location:164263
    zf-C2H2_2; C2H2 type zinc-finger (2 copies)