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VPS3 CORVET complex subunit VPS3 [ Saccharomyces cerevisiae S288C ]

Gene ID: 852106, updated on 5-Sep-2021

Summary

Gene symbol
VPS3
Gene description
CORVET complex subunit VPS3
Primary source
SGD:S000002903
Locus tag
YDR495C
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Also known as
PEP6; VPL3; VPT17
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Genomic context

See VPS3 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
1
Sequence:
Chromosome: IV; NC_001136.10 (1438115..1441150, complement)

Chromosome IV - NC_001136.10Genomic Context describing neighboring genes Neighboring gene Mzm1p Neighboring gene mitochondrial 37S ribosomal protein RSM28 Neighboring gene Puf6p Neighboring gene myo-inositol transporter ITR1

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

Gene Ontology Provided by GO

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in autophagy IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in endosomal vesicle fusion IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in protein targeting to vacuole IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in vacuolar acidification IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in vacuole inheritance IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
part_of CORVET complex IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in endosome IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in fungal-type vacuole membrane IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
is_active_in membrane IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
CORVET complex subunit VPS3
NP_010783.3
  • Component of CORVET membrane tethering complex; cytoplasmic protein required for the sorting and processing of soluble vacuolar proteins, acidification of the vacuolar lumen, and assembly of the vacuolar H+-ATPase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001136.10 Reference assembly

    Range
    1438115..1441150 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001180803.3NP_010783.3  TPA: CORVET complex subunit VPS3 [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_010783.3

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P23643
    Conserved Domains (1) summary
    COG5271
    Location:11120
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
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