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RTN1 Rtn1p [ Saccharomyces cerevisiae S288c ]

Gene ID: 851819, updated on 5-Mar-2017
Gene symbol
RTN1
Gene description
Rtn1p
Primary source
SGD:S000002641
Locus tag
YDR233C
Gene type
protein coding
RNA name
Rtn1p
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288c (strain: S288c)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
See RTN1 in Map Viewer
Location:
chromosome: IV
Exon count:
1
Sequence:
Chromosome: IV; NC_001136.10 (929470..930357, complement)

Chromosome IV - NC_001136.10Genomic Context describing neighboring genes Neighboring gene Cox20p Neighboring gene 5-aminolevulinate synthase Neighboring gene homoaconitate hydratase LYS4 Neighboring gene mRNA splicing protein PRP42

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Products Interactant Other Gene Complex Source Pubs Description

Homology

Gene Ontology Provided by GO

Function Evidence Code Pubs
molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
ER-dependent peroxisome organization IGI
Inferred from Genetic Interaction
more info
PubMed 
endoplasmic reticulum inheritance IGI
Inferred from Genetic Interaction
more info
PubMed 
endoplasmic reticulum organization IGI
Inferred from Genetic Interaction
more info
PubMed 
endoplasmic reticulum tubular network maintenance IGI
Inferred from Genetic Interaction
more info
PubMed 
endoplasmic reticulum tubular network organization IGI
Inferred from Genetic Interaction
more info
PubMed 
endoplasmic reticulum tubular network organization IMP
Inferred from Mutant Phenotype
more info
PubMed 
endoplasmic reticulum tubular network organization IPI
Inferred from Physical Interaction
more info
PubMed 
nuclear pore complex assembly IGI
Inferred from Genetic Interaction
more info
PubMed 
response to endoplasmic reticulum stress IGI
Inferred from Genetic Interaction
more info
PubMed 
Component Evidence Code Pubs
Golgi apparatus IDA
Inferred from Direct Assay
more info
PubMed 
cell periphery IDA
Inferred from Direct Assay
more info
PubMed 
cortical endoplasmic reticulum IDA
Inferred from Direct Assay
more info
PubMed 
endoplasmic reticulum IDA
Inferred from Direct Assay
more info
PubMed 
endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 
endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 
endoplasmic reticulum tubular network IDA
Inferred from Direct Assay
more info
PubMed 
integral component of endoplasmic reticulum membrane IDA
Inferred from Direct Assay
more info
PubMed 
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
membrane IEA
Inferred from Electronic Annotation
more info
 
mitochondrion IDA
Inferred from Direct Assay
more info
PubMed 
Names
Rtn1p
NP_010519.3
  • Reticulon protein; involved in nuclear pore assembly and maintenance of tubular ER morphology; promotes membrane curvature; regulates the ER asymmetry-induced inheritance block during ER stress; role in ER-derived peroxisomal biogenesis; increases tubular ER when overexpressed; mutants have reduced phosphatidylserine transfer between the ER and mitochondria; interacts with exocyst subunit Sec6p, Yip3p, and Sbh1p; member of the RTNLA subfamily

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001136.10 Reference assembly

    Range
    929470..930357 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001180541.3NP_010519.3  TPA: Rtn1p [Saccharomyces cerevisiae S288c]

    See identical proteins and their annotated locations for NP_010519.3

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q04947
    Conserved Domains (1) summary
    pfam02453
    Location:21178
    Reticulon; Reticulon
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