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RPN4 stress-regulated transcription factor RPN4 [ Saccharomyces cerevisiae S288C ]

Gene ID: 851542, updated on 5-Sep-2021

Summary

Gene symbol
RPN4
Gene description
stress-regulated transcription factor RPN4
Primary source
SGD:S000002178
Locus tag
YDL020C
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Also known as
SON1; UFD5
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Genomic context

See RPN4 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
1
Sequence:
Chromosome: IV; NC_001136.10 (415113..416708, complement)

Chromosome IV - NC_001136.10Genomic Context describing neighboring genes Neighboring gene glycerol-3-phosphate dehydrogenase (NAD(+)) GPD1 Neighboring gene phosphoglycerate mutase family protein GPM2 Neighboring gene oxysterol-binding protein related protein OSH2 Neighboring gene Erp3p

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by GO

Process Evidence Code Pubs
involved_in negative regulation of transcription by RNA polymerase II HMP PubMed 
involved_in negative regulation of transcription by RNA polymerase II IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in negative regulation of transcription from RNA polymerase II promoter in response to stress HMP PubMed 
involved_in positive regulation of transcription by RNA polymerase II HMP PubMed 
involved_in positive regulation of transcription by RNA polymerase II IDA
Inferred from Direct Assay
more info
PubMed 
involved_in positive regulation of transcription by RNA polymerase II IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in positive regulation of transcription by RNA polymerase II IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of transcription from RNA polymerase II promoter in response to arsenic-containing substance HMP PubMed 
involved_in positive regulation of transcription from RNA polymerase II promoter in response to arsenic-containing substance IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of transcription from RNA polymerase II promoter in response to stress HMP PubMed 
involved_in positive regulation of transcription from RNA polymerase II promoter in response to stress IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in regulation of DNA repair IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
located_in cytoplasm HDA PubMed 
located_in nucleus HDA PubMed 
located_in nucleus IDA
Inferred from Direct Assay
more info
PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
stress-regulated transcription factor RPN4
NP_010264.3
  • Transcription factor that stimulates expression of proteasome genes; Rpn4p levels are in turn regulated by the 26S proteasome in a negative feedback control mechanism; RPN4 is transcriptionally regulated by various stress responses; relative distribution to the nucleus increases upon DNA replication stress

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001136.10 Reference assembly

    Range
    415113..416708 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001180079.3NP_010264.3  TPA: stress-regulated transcription factor RPN4 [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_010264.3

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q03465
    Conserved Domains (1) summary
    sd00017
    Location:450468
    ZF_C2H2; C2H2 Zn finger [structural motif]
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