Format

Send to:

Choose Destination

RPL6B ribosomal 60S subunit protein L6B [ Saccharomyces cerevisiae S288C ]

Gene ID: 851169, updated on 7-Jul-2019

Summary

Gene symbol
RPL6B
Gene description
ribosomal 60S subunit protein L6B
Primary source
SGD:S000004440
Locus tag
YLR448W
Gene type
protein coding
RNA name
ribosomal 60S subunit protein L6B
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces

Genomic context

See RPL6B in Genome Data Viewer
Location:
chromosome: XII
Exon count:
2
Sequence:
Chromosome: XII; NC_001144.5 (1028854..1029768)

Chromosome XII - NC_001144.5Genomic Context describing neighboring genes Neighboring gene hexokinase Neighboring gene H(+)-transporting V0 sector ATPase subunit d Neighboring gene peptidylprolyl isomerase FPR4 Neighboring gene hydroxymethylglutaryl-CoA reductase (NADPH) HMG2

Pathways from BioSystems

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

  • Homologs of the RPL6B gene: The RPL6B gene is conserved in chimpanzee, Rhesus monkey, S.cerevisiae, K.lactis, E.gossypii, S.pombe, M.oryzae, and N.crassa.

Gene Ontology Provided by GO

Function Evidence Code Pubs
RNA binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
RNA binding IDA
Inferred from Direct Assay
more info
PubMed 
structural constituent of ribosome IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
structural constituent of ribosome IDA
Inferred from Direct Assay
more info
PubMed 
structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
cytoplasmic translation IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
cytoplasmic translation IDA
Inferred from Direct Assay
more info
PubMed 
ribosomal large subunit assembly IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
ribosomal large subunit assembly IMP
Inferred from Mutant Phenotype
more info
PubMed 
translation IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
cytoplasm IEA
Inferred from Electronic Annotation
more info
 
cytosolic large ribosomal subunit IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
cytosolic large ribosomal subunit IDA
Inferred from Direct Assay
more info
PubMed 
ribosome IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
ribosomal 60S subunit protein L6B
NP_013553.1
  • Ribosomal 60S subunit protein L6B; binds 5.8S rRNA; homologous to mammalian ribosomal protein L6, no bacterial homolog; RPL6B has a paralog, RPL6A, that arose from the whole genome duplication

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001144.5 Reference assembly

    Range
    1028854..1029768
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001182336.1NP_013553.1  TPA: ribosomal 60S subunit protein L6B [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_013553.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P05739
    Conserved Domains (1) summary
    cd13156
    Location:26176
    KOW_RPL6; KOW motif of Ribosomal Protein L6
Support Center