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NDL1 Ndl1p [ Saccharomyces cerevisiae S288C ]

Gene ID: 850956, updated on 5-Aug-2018

Summary

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Gene symbol
NDL1
Gene description
Ndl1p
Primary source
SGD:S000004244
Locus tag
YLR254C
Gene type
protein coding
RNA name
Ndl1p
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces

Genomic context

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See NDL1 in Genome Data Viewer
Location:
chromosome: XII
Exon count:
1
Sequence:
Chromosome: XII; NC_001144.5 (644404..644973, complement)

Chromosome XII - NC_001144.5Genomic Context describing neighboring genes Neighboring gene ethanol metabolism protein Neighboring gene Mcp2p Neighboring gene hypothetical protein Neighboring gene Hap1p

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001144.5

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. NudEL targets dynein to microtubule ends through LIS1. Li J, et al. Nat Cell Biol, 2005 Jul. PMID 15965467, Free PMC Article
  2. A computationally directed screen identifying interacting coiled coils from Saccharomyces cerevisiae. Newman JR, et al. Proc Natl Acad Sci U S A, 2000 Nov 21. PMID 11087867, Free PMC Article
  3. Functional analysis with a barcoder yeast gene overexpression system. Douglas AC, et al. G3 (Bethesda), 2012 Oct. PMID 23050238, Free PMC Article
  4. A robust toolkit for functional profiling of the yeast genome. Pan X, et al. Mol Cell, 2004 Nov 5. PMID 15525520
  5. Coiled-coil networking shapes cell molecular machinery. Wang Y, et al. Mol Biol Cell, 2012 Oct. PMID 22875988, Free PMC Article

See all (19) citations in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

  1. Ndl1 regulates dynein targeting to microtubule ends through LIS1, with which it interacts biochemically.
    Title: NudEL targets dynein to microtubule ends through LIS1.
Submit: New GeneRIF Correction

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by GO

Function Evidence Code Pubs
microtubule plus-end binding IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
cell cycle IEA
Inferred from Electronic Annotation
more info
  
cell division IEA
Inferred from Electronic Annotation
more info
  
nuclear migration along microtubule IMP
Inferred from Mutant Phenotype
more info
 PubMed 
nuclear migration along microtubule IPI
Inferred from Physical Interaction
more info
 PubMed 
Component Evidence Code Pubs
cytoplasm HDA PubMed 
cytoplasm IEA
Inferred from Electronic Annotation
more info
  
cytoplasmic microtubule IDA
Inferred from Direct Assay
more info
 PubMed 
cytoskeleton IEA
Inferred from Electronic Annotation
more info
  
microtubule IEA
Inferred from Electronic Annotation
more info
  
nucleus HDA PubMed 
nucleus IDA
Inferred from Direct Assay
more info
 PubMed 
nucleus IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Ndl1p
NP_013355.1
  • Homolog of nuclear distribution factor NudE; NUDEL; interacts with Pac1p and regulates dynein targeting to microtubule plus ends

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001144.5 Reference assembly

    Range
    644404..644973 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001182141.1 → NP_013355.1  TPA: Ndl1p [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_013355.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q06568
    Conserved Domains (1) summary
    pfam04111
    Location:14 → 112
    APG6; Autophagy protein Apg6
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q06568.1

Gene LinkOut

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