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ARP6 Arp6p [ Saccharomyces cerevisiae S288C ]

Gene ID: 850774, updated on 7-Jul-2024

Summary

Gene symbol
ARP6
Gene description
Arp6p
Primary source
FungiDB:YLR085C
Locus tag
YLR085C
See related
SGD:S000004075; AllianceGenome:SGD:S000004075; VEuPathDB:YLR085C
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Enables nucleosome binding activity. Involved in histone exchange. Located in cytoplasm and nuclear periphery. Part of Swr1 complex. Orthologous to human ACTR6 (actin related protein 6). [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

See ARP6 in Genome Data Viewer
Location:
chromosome: XII
Exon count:
1
Sequence:
Chromosome: XII; NC_001144.5 (300673..301989, complement)

Chromosome XII - NC_001144.5Genomic Context describing neighboring genes Neighboring gene Emp70p Neighboring gene Rax2p Neighboring gene condensin subunit SMC4 Neighboring gene Csf1p

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables nucleosome binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables nucleosome binding IMP
Inferred from Mutant Phenotype
more info
PubMed 
Process Evidence Code Pubs
involved_in chromatin organization IEA
Inferred from Electronic Annotation
more info
 
involved_in chromatin remodeling IDA
Inferred from Direct Assay
more info
PubMed 
involved_in chromatin remodeling IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
part_of Swr1 complex IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of Swr1 complex IDA
Inferred from Direct Assay
more info
PubMed 
located_in cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in intracellular non-membrane-bounded organelle IEA
Inferred from Electronic Annotation
more info
 
located_in nuclear periphery IDA
Inferred from Direct Assay
more info
PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
Arp6p
NP_013186.1
  • Actin-related protein that binds nucleosomes; a component of the SWR1 complex, which exchanges histone variant H2AZ (Htz1p) for chromatin-bound histone H2A

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001144.5 Reference assembly

    Range
    300673..301989 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001181972.1NP_013186.1  TPA: Arp6p [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_013186.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6VY85, Q12509
    UniProtKB/TrEMBL
    A0A8H4F8D4, A7A0Y9, B3LT53, C7GQQ9, C8ZD56, G2WIS7, N1NZJ6
    Conserved Domains (1) summary
    smart00268
    Location:3433
    ACTIN; Actin