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RNP1 Rnp1p [ Saccharomyces cerevisiae S288C ]

Gene ID: 850680, updated on 8-Sep-2022

Summary

Gene symbol
RNP1
Gene description
Rnp1p
Primary source
SGD:S000003969
Locus tag
YLL046C
See related
AllianceGenome:SGD:S000003969
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Predicted to enable RNA binding activity. Involved in ribosome biogenesis. Located in cytoplasm. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

See RNP1 in Genome Data Viewer
Location:
chromosome: XII
Exon count:
1
Sequence:
Chromosome: XII; NC_001144.5 (46714..47463, complement)

Chromosome XII - NC_001144.5Genomic Context describing neighboring genes Neighboring gene Ldb18p Neighboring gene bile acid-transporting ATPase YBT1 Neighboring gene ribosomal 60S subunit protein L8B Neighboring gene Fps1p

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by GO

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 
enables RNA binding ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in ribosome biogenesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
located_in cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
Rnp1p
NP_013054.1
  • Ribonucleoprotein that contains two RNA recognition motifs (RRM); RNP1 has a paralog, SBP1, that arose from the whole genome duplication

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001144.5 Reference assembly

    Range
    46714..47463 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001181866.1NP_013054.1  TPA: Rnp1p [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_013054.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6VXW1, P32385
    UniProtKB/TrEMBL
    A0A0L8VKK6, A0A6A5PST1, A0A815ZZH6, A7A0L3, B3LTC9, B5VMQ4, C7GNE8, C8ZCS8, H0GJU0, N1NY51
    Conserved Domains (2) summary
    smart00360
    Location:36109
    RRM; RNA recognition motif
    COG0724
    Location:22224
    RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]