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MIR22HG MIR22 host gene [ Homo sapiens (human) ]

Gene ID: 84981, updated on 11-Sep-2019

Summary

Official Symbol
MIR22HGprovided by HGNC
Official Full Name
MIR22 host geneprovided by HGNC
Primary source
HGNC:HGNC:28219
See related
Ensembl:ENSG00000186594
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
C17orf91
Expression
Ubiquitous expression in adrenal (RPKM 35.5), bone marrow (RPKM 31.9) and 24 other tissues See more

Genomic context

See MIR22HG in Genome Data Viewer
Location:
17p13.3
Exon count:
4
Annotation release Status Assembly Chr Location
109.20190905 current GRCh38.p13 (GCF_000001405.39) 17 NC_000017.11 (1711504..1716272, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (1614798..1619566, complement)

Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene pre-mRNA processing factor 8 Neighboring gene TLC domain containing 2 Neighboring gene microRNA 22 Neighboring gene WD repeat domain 81 Neighboring gene serpin family F member 2

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Phenotypes

NHGRI GWAS Catalog

Description
Common variants in the calcium-sensing receptor gene are associated with total serum calcium levels.
NHGRI GWA Catalog
Discovery and fine mapping of serum protein loci through transethnic meta-analysis.
NHGRI GWA Catalog

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Other Names

  • MIR22 host gene (non-protein coding)

Clone Names

  • MGC14376, MGC149751, DKFZp686O06159

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_028502.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longest transcript.
    Source sequence(s)
    AC130343, AF070569, AI147777, BX648321, DA543295
    Related
    ENST00000574306.1
  2. NR_028503.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) uses a different splicing pattern at its 3' end, compared to variant 1.
    Source sequence(s)
    AF070569, AI147777, BX509423, DA543295
  3. NR_028504.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3) includes an additional internal exon in its 5' region and uses a different splicing pattern at its 3' end, compared to variant 1.
    Source sequence(s)
    AF070569, AI147777, BC119721, DA543295
    Related
    ENST00000334146.7
  4. NR_028505.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (4) uses a different splicing pattern at its 3' end, compared to variant 1.
    Source sequence(s)
    AF070569, AI147777, BM755383, DA543295

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000017.11 Reference GRCh38.p13 Primary Assembly

    Range
    1711504..1716272 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p13 ALT_REF_LOCI_1

Genomic

  1. NT_187611.1 Reference GRCh38.p13 ALT_REF_LOCI_1

    Range
    141532..146300 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001001870.1: Suppressed sequence

    Description
    NM_001001870.1: This RefSeq was permanently suppressed because it is now thought that this gene does not encode a protein.
  2. NM_032895.2: Suppressed sequence

    Description
    NM_032895.2: This RefSeq was permanently suppressed because it is now thought that this gene does not encode a protein.
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