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SNHG7 small nucleolar RNA host gene 7 [ Homo sapiens (human) ]

Gene ID: 84973, updated on 5-Dec-2021

Summary

Official Symbol
SNHG7provided by HGNC
Official Full Name
small nucleolar RNA host gene 7provided by HGNC
Primary source
HGNC:HGNC:28254
See related
Ensembl:ENSG00000233016
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
NCRNA00061
Expression
Ubiquitous expression in ovary (RPKM 15.1), thyroid (RPKM 12.1) and 25 other tissues See more
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Genomic context

See SNHG7 in Genome Data Viewer
Location:
9q34.3
Exon count:
5
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 9 NC_000009.12 (136724594..136728184, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (139619046..139622636, complement)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene EGF like domain multiple 7 Neighboring gene microRNA 126 Neighboring gene 1-acylglycerol-3-phosphate O-acyltransferase 2 Neighboring gene divergent protein kinase domain 1B Neighboring gene small nucleolar RNA, H/ACA box 17B Neighboring gene small nucleolar RNA, H/ACA box 17A Neighboring gene uncharacterized LOC100128593 Neighboring gene lipocalin 10 Neighboring gene microRNA 6722 Neighboring gene lipocalin 6

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

General gene information

Markers

Other Names

  • small nucleolar RNA host gene (non-protein coding) 7
  • small nucleolar RNA host gene 7 (non-protein coding)

Clone Names

  • MGC16037

Gene Ontology Provided by GOA

Process Evidence Code Pubs
involved_in RNA processing IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_003672.2 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) has an unspliced 3' sequence and is the longest transcript.
    Source sequence(s)
    AL355987
    Related
    ENST00000447221.1
  2. NR_024542.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) consists of four exons and the 3' sequence is spliced, as compared to variant 1.
    Source sequence(s)
    BC042369, BC059956, BC061888
    Related
    ENST00000653276.1
  3. NR_024543.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3) consists of five exons and the 3' sequence is spliced, as compared to variant 1.
    Source sequence(s)
    BC042369, BC059956, BC061888
    Related
    ENST00000416970.5

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p13 Primary Assembly

    Range
    136724594..136728184 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_032887.1: Suppressed sequence

    Description
    NM_032887.1: This RefSeq record was removed by NCBI staff. Contact info@ncbi.nlm.nih.gov for further information.
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