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PNMA6A PNMA family member 6A [ Homo sapiens (human) ]

Gene ID: 84968, updated on 17-Sep-2022

Summary

Official Symbol
PNMA6Aprovided by HGNC
Official Full Name
PNMA family member 6Aprovided by HGNC
Primary source
HGNC:HGNC:28248
See related
Ensembl:ENSG00000235961 MIM:300917; AllianceGenome:HGNC:28248
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
MA6; PNMA6; PNMA6C
Expression
Biased expression in brain (RPKM 8.1), kidney (RPKM 5.5) and 9 other tissues See more
Orthologs
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Genomic context

See PNMA6A in Genome Data Viewer
Location:
Xq28
Exon count:
2
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (153072454..153075019)
110 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (151340002..151341966)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (152338299..152340864)

Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene high mobility group nucleosomal binding domain 2 pseudogene 48 Neighboring gene PNMA family member 3 Neighboring gene PNMA family member 6B (pseudogene) Neighboring gene uncharacterized LOC124905225

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

Clone Names

  • FLJ30760, FLJ77696, MGC15827

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 

General protein information

Preferred Names
paraneoplastic antigen-like protein 6A
Names
paraneoplastic Ma antigen family member 6A
paraneoplastic Ma antigen family member 6C
paraneoplastic antigen-like 6A related protein
paraneoplastic antigen-like protein 6C

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_016372.2 RefSeqGene

    Range
    4983..7548
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_032882.6NP_116271.3  paraneoplastic antigen-like protein 6A

    See identical proteins and their annotated locations for NP_116271.3

    Status: VALIDATED

    Source sequence(s)
    AC243374, AC243428
    Consensus CDS
    CCDS14719.1
    UniProtKB/Swiss-Prot
    P0CW24, Q96A40
    Related
    ENSP00000391488.3, ENST00000421798.5
    Conserved Domains (1) summary
    pfam14893
    Location:1318
    PNMA; PNMA

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

    Range
    153072454..153075019
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060947.1 Alternate T2T-CHM13v2.0

    Range
    151340002..151341966
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)