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SPRYD3 SPRY domain containing 3 [ Homo sapiens (human) ]

Gene ID: 84926, updated on 21-Dec-2019

Summary

Official Symbol
SPRYD3provided by HGNC
Official Full Name
SPRY domain containing 3provided by HGNC
Primary source
HGNC:HGNC:25920
See related
Ensembl:ENSG00000167778
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Ubiquitous expression in brain (RPKM 58.3), fat (RPKM 38.7) and 24 other tissues See more
Orthologs

Genomic context

See SPRYD3 in Genome Data Viewer
Location:
12q13.13
Exon count:
11
Annotation release Status Assembly Chr Location
109.20191205 current GRCh38.p13 (GCF_000001405.39) 12 NC_000012.12 (53064316..53079390, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 12 NC_000012.11 (53458100..53473204, complement)

Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC283335 Neighboring gene tensin 2 Neighboring gene microRNA 6757 Neighboring gene insulin like growth factor binding protein 6 Neighboring gene sterol O-acyltransferase 2

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • FLJ14800

General protein information

Preferred Names
SPRY domain-containing protein 3
NP_116229.1

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_032840.3NP_116229.1  SPRY domain-containing protein 3

    See identical proteins and their annotated locations for NP_116229.1

    Status: VALIDATED

    Source sequence(s)
    BC136312, CA427084, DA389433
    Consensus CDS
    CCDS8845.1
    UniProtKB/Swiss-Prot
    Q8NCJ5
    UniProtKB/TrEMBL
    A0A024RAX4
    Related
    ENSP00000301463.4, ENST00000301463.9
    Conserved Domains (1) summary
    cd12908
    Location:220438
    SPRYD3; SPRY domain-containing protein 3

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20191205

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000012.12 Reference GRCh38.p13 Primary Assembly

    Range
    53064316..53079390 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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