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FAM222A family with sequence similarity 222 member A [ Homo sapiens (human) ]

Gene ID: 84915, updated on 25-Jan-2022

Summary

Official Symbol
FAM222Aprovided by HGNC
Official Full Name
family with sequence similarity 222 member Aprovided by HGNC
Primary source
HGNC:HGNC:25915
See related
Ensembl:ENSG00000139438 AllianceGenome:HGNC:25915
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
C12orf34
Expression
Broad expression in testis (RPKM 6.4), brain (RPKM 5.9) and 16 other tissues See more
Orthologs
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Genomic context

See FAM222A in Genome Data Viewer
Location:
12q24.11
Exon count:
5
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 12 NC_000012.12 (109713825..109770509)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 12 NC_000012.11 (110151630..110208300)

Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene metabolism of cobalamin associated B Neighboring gene mevalonate kinase Neighboring gene RN7SK pseudogene 250 Neighboring gene HNF1 motif-containing MPRA enhancer 206 Neighboring gene FAM222A antisense RNA 1 Neighboring gene transient receptor potential cation channel subfamily V member 4 Neighboring gene uncharacterized LOC105369975 Neighboring gene microRNA 4497

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • FLJ14721

General protein information

Preferred Names
protein FAM222A
Names
aggregatin

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_032829.3NP_116218.2  protein FAM222A

    See identical proteins and their annotated locations for NP_116218.2

    Status: VALIDATED

    Source sequence(s)
    AC007834, BC020193, DN994281
    Consensus CDS
    CCDS9133.1
    UniProtKB/Swiss-Prot
    Q5U5X8
    UniProtKB/TrEMBL
    A0A024RBN3
    Related
    ENSP00000443292.1, ENST00000538780.2
    Conserved Domains (1) summary
    pfam15258
    Location:35235
    FAM222A; Protein family of FAM222A

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000012.12 Reference GRCh38.p13 Primary Assembly

    Range
    109713825..109770509
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024449229.1XP_024304997.1  protein FAM222A isoform X2

    Conserved Domains (1) summary
    pfam15258
    Location:1201
    FAM222A; Protein family of FAM222A
  2. XM_017020055.1XP_016875544.1  protein FAM222A isoform X1

    UniProtKB/Swiss-Prot
    Q5U5X8
    UniProtKB/TrEMBL
    A0A024RBN3
    Conserved Domains (1) summary
    pfam15258
    Location:35235
    FAM222A; Protein family of FAM222A
  3. XM_006719654.2XP_006719717.1  protein FAM222A isoform X1

    See identical proteins and their annotated locations for XP_006719717.1

    UniProtKB/Swiss-Prot
    Q5U5X8
    UniProtKB/TrEMBL
    A0A024RBN3
    Related
    ENSP00000351783.3, ENST00000358906.3
    Conserved Domains (1) summary
    pfam15258
    Location:35235
    FAM222A; Protein family of FAM222A
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