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PLPP7 phospholipid phosphatase 7 (inactive) [ Homo sapiens (human) ]

Gene ID: 84814, updated on 2-Apr-2018
Official Symbol
PLPP7provided by HGNC
Official Full Name
phospholipid phosphatase 7 (inactive)provided by HGNC
Primary source
HGNC:HGNC:28174
See related
Ensembl:ENSG00000160539 Vega:OTTHUMG00000020822
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
NET39; C9orf67; PPAPDC3
Expression
Biased expression in heart (RPKM 14.9), brain (RPKM 2.9) and 9 other tissues See more
Orthologs
Location:
9q34.13
Exon count:
4
Annotation release Status Assembly Chr Location
109 current GRCh38.p12 (GCF_000001405.38) 9 NC_000009.12 (131289694..131309262)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (134165069..134184649)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene VISTA enhancer hs1963 Neighboring gene family with sequence similarity 78 member A Neighboring gene uncharacterized LOC105376299 Neighboring gene uncharacterized LOC105376300 Neighboring gene proline rich coiled-coil 2B Neighboring gene small nucleolar RNA, C/D box 62A

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Jun 15 11:32:44 2016

Markers

Homology

Clone Names

  • FLJ14662, KIAA0515, MGC12921

Gene Ontology Provided by GOA

Process Evidence Code Pubs
negative regulation of myotube differentiation IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
nuclear envelope IEA
Inferred from Electronic Annotation
more info
 
Preferred Names
inactive phospholipid phosphatase 7
Names
nuclear envelope transmembrane protein NET39
phosphatidic acid phosphatase type 2 domain containing 3
phosphatidic acid phosphatase type 2 domain-containing protein 3
probable lipid phosphate phosphatase PPAPDC3
NP_116117.3
XP_005272287.1
XP_005272288.1

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_032728.3NP_116117.3  inactive phospholipid phosphatase 7

    See identical proteins and their annotated locations for NP_116117.3

    Status: VALIDATED

    Source sequence(s)
    AK075207, AL354855, BC006362
    Consensus CDS
    CCDS6942.1
    UniProtKB/Swiss-Prot
    Q8NBV4
    Related
    ENSP00000361338.3, OTTHUMP00000022398, ENST00000372264.3, OTTHUMT00000054724
    Conserved Domains (1) summary
    cd03391
    Location:97255
    PAP2_containing_2_like; PAP2, subfamily similar to human phosphatidic_acid_phosphatase_type_2_domain_containing_2. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to eukaryota, lacks functional characterization and may act as a ...

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p12 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p12 Primary Assembly

    Range
    131289694..131309262
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005272230.4XP_005272287.1  inactive phospholipid phosphatase 7 isoform X1

    Conserved Domains (1) summary
    cl00474
    Location:97152
    PAP2_like; PAP2_like proteins, a super-family of histidine phosphatases and vanadium haloperoxidases, includes type 2 phosphatidic acid phosphatase or lipid phosphate phosphatase (LPP), Glucose-6-phosphatase, Phosphatidylglycerophosphatase B and bacterial acid ...
  2. XM_005272231.2XP_005272288.1  inactive phospholipid phosphatase 7 isoform X2

    UniProtKB/TrEMBL
    X6R886
    Related
    ENSP00000361335.1, OTTHUMP00000022399, ENST00000372261.1
    Conserved Domains (1) summary
    cl00474
    Location:97150
    PAP2_like; PAP2_like proteins, a super-family of histidine phosphatases and vanadium haloperoxidases, includes type 2 phosphatidic acid phosphatase or lipid phosphate phosphatase (LPP), Glucose-6-phosphatase, Phosphatidylglycerophosphatase B and bacterial acid ...
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