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CROCCP2 CROCC pseudogene 2 [ Homo sapiens (human) ]

Gene ID: 84809, updated on 25-Oct-2022

Summary

Official Symbol
CROCCP2provided by HGNC
Official Full Name
CROCC pseudogene 2provided by HGNC
Primary source
HGNC:HGNC:28170
See related
Ensembl:ENSG00000291072 AllianceGenome:HGNC:28170
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
CROCCL1
Summary
Predicted to be involved in centrosome cycle. Predicted to be located in ciliary rootlet. [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in spleen (RPKM 16.1), duodenum (RPKM 15.2) and 25 other tissues See more
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Genomic context

See CROCCP2 in Genome Data Viewer
Location:
1p36.13
Exon count:
7
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (16618256..16630906, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (16080315..16091157, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (16944751..16957401, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene tRNA-Lys (CTT) 7-1 Neighboring gene NBPF member 1 Neighboring gene rootletin-like Neighboring gene macrophage stimulating 1 pseudogene 2 Neighboring gene RNA, U1 small nuclear 3

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Other Names

  • ciliary rootlet coiled-coil, rootletin pseudogene 2
  • ciliary rootlet coiled-coil, rootletin-like 1

Clone Names

  • MGC12760

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_026752.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AA584096, BC006312, BC010508, BC047736
    Related
    ENST00000640476.1

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    16618256..16630906 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 PATCHES

Genomic

  1. NW_025791756.1 Reference GRCh38.p14 PATCHES

    Range
    1181201..1193873
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    16080315..16091157 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_032723.2: Suppressed sequence

    Description
    NM_032723.2: This RefSeq record was removed by NCBI staff. Contact info@ncbi.nlm.nih.gov for further information.