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C19orf48 chromosome 19 open reading frame 48 [ Homo sapiens (human) ]

Gene ID: 84798, updated on 11-Jun-2021

Summary

Official Symbol
C19orf48provided by HGNC
Official Full Name
chromosome 19 open reading frame 48provided by HGNC
Gene description
multidrug resistance-related protein
Primary source
HGNC:HGNC:29667
See related
Ensembl:ENSG00000167747 MIM:618864
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
CA916798
Expression
Ubiquitous expression in prostate (RPKM 26.8), bone marrow (RPKM 14.0) and 25 other tissues See more
Orthologs
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Genomic context

See C19orf48 in Genome Data Viewer
Location:
19q13.33
Exon count:
6
Annotation release Status Assembly Chr Location
109.20210514 current GRCh38.p13 (GCF_000001405.39) 19 NC_000019.10 (50797704..50804594, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 19 NC_000019.9 (51300950..51308110, complement)

Chromosome 19 - NC_000019.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105372440 Neighboring gene uncharacterized LOC105372439 Neighboring gene acid phosphatase 4 Neighboring gene small nucleolar RNA, C/D box 88B Neighboring gene small nucleolar RNA, C/D box 88A Neighboring gene small nucleolar RNA, C/D box 88C Neighboring gene long intergenic non-protein coding RNA 1869 Neighboring gene kallikrein 1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Other Names

  • multidrug resistance-related protein
  • uncharacterized protein C19orf48

Clone Names

  • MGC13170

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_171554.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC010325
  2. NR_171555.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC010325
    Related
    ENST00000641834.1
  3. NR_171556.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC010325
    Related
    ENST00000598463.5
  4. NR_171557.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC010325
  5. NR_171558.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC010325
  6. NR_171559.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC010325
  7. NR_171560.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC010325
  8. NR_171561.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC010325
  9. NR_171562.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC010325
  10. NR_171563.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC010325

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20210514

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000019.10 Reference GRCh38.p13 Primary Assembly

    Range
    50797704..50804594 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001290149.2: Suppressed sequence

    Description
    NM_001290149.2: This RefSeq was removed because it is now thought that this gene is a pseudogene.
  2. NM_001290150.2: Suppressed sequence

    Description
    NM_001290150.2: This RefSeq was removed because it is now thought that this gene is a pseudogene.
  3. NM_001290151.2: Suppressed sequence

    Description
    NM_001290151.2: This RefSeq was removed because it is now thought that this gene is a pseudogene.
  4. NM_001290152.2: Suppressed sequence

    Description
    NM_001290152.2: This RefSeq was removed because it is now thought that this gene is a pseudogene.
  5. NM_001290153.2: Suppressed sequence

    Description
    NM_001290153.2: This RefSeq was removed because it is now thought that this gene is a pseudogene.
  6. NM_001290154.2: Suppressed sequence

    Description
    NM_001290154.2: This RefSeq was removed because it is now thought that this gene is a pseudogene.
  7. NM_001290155.2: Suppressed sequence

    Description
    NM_001290155.2: This RefSeq was removed because it is now thought that this gene is a pseudogene.
  8. NM_032712.3: Suppressed sequence

    Description
    NM_032712.3: This RefSeq was removed because it is now thought that this gene is a pseudogene.
  9. NM_199249.3: Suppressed sequence

    Description
    NM_199249.3: This RefSeq was removed because it is now thought that this gene is a pseudogene.
  10. NM_199250.3: Suppressed sequence

    Description
    NM_199250.3: This RefSeq was removed because it is now thought that this gene is a pseudogene.
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