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FOXD2-AS1 FOXD2 adjacent opposite strand RNA 1 [ Homo sapiens (human) ]

Gene ID: 84793, updated on 22-Jan-2023

Summary

Official Symbol
FOXD2-AS1provided by HGNC
Official Full Name
FOXD2 adjacent opposite strand RNA 1provided by HGNC
Primary source
HGNC:HGNC:44256
See related
Ensembl:ENSG00000237424 AllianceGenome:HGNC:44256
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

See FOXD2-AS1 in Genome Data Viewer
Location:
1p33
Exon count:
1
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (47432133..47434641, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (47310585..47313093, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (47897805..47900313, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 1389 Neighboring gene Sharpr-MPRA regulatory region 7712 Neighboring gene forkhead box E3 Neighboring gene forkhead box D2 Neighboring gene ribosomal protein L21 pseudogene 24

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

General gene information

Markers

Other Names

  • FOXD2 antisense RNA 1 (head to head)
  • FOXD2 antisense RNA 1 (non-protein coding)

Clone Names

  • MGC12982

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_026878.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL607122, BC006113
    Related
    ENST00000445551.1

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    47432133..47434641 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    47310585..47313093 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_032707.1: Suppressed sequence

    Description
    NM_032707.1: This RefSeq was permanently suppressed because it is now thought that this gene does not encode a protein.