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MFSD14B major facilitator superfamily domain containing 14B [ Homo sapiens (human) ]

Gene ID: 84641, updated on 7-Jun-2020

Summary

Official Symbol
MFSD14Bprovided by HGNC
Official Full Name
major facilitator superfamily domain containing 14Bprovided by HGNC
Primary source
HGNC:HGNC:23376
See related
Ensembl:ENSG00000148110
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
HIATL1
Expression
Ubiquitous expression in esophagus (RPKM 21.3), lung (RPKM 18.5) and 25 other tissues See more
Orthologs

Genomic context

See MFSD14B in Genome Data Viewer
Location:
9q22.32
Exon count:
14
Annotation release Status Assembly Chr Location
109.20200522 current GRCh38.p13 (GCF_000001405.39) 9 NC_000009.12 (94374327..94461042)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (97136833..97223202)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100132077 Neighboring gene proline-rich nuclear receptor coactivator 2-like Neighboring gene prothymosin alpha pseudogene 12 Neighboring gene yrdC N(6)-threonylcarbamoyltransferase domain containing pseudogene 1 Neighboring gene uncharacterized LOC107987100 Neighboring gene leishmanolysin like peptidase pseudogene Neighboring gene RNA, U6 small nuclear 669, pseudogene Neighboring gene prostate cancer associated transcript 7 Neighboring gene fructose-bisphosphatase 2

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • FLJ14753, MGC117350

Gene Ontology Provided by GOA

Function Evidence Code Pubs
transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
transmembrane transport IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
hippocampus abundant transcript-like protein 1
Names
hippocampus abundant transcript-like 1

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_032558.3NP_115947.2  hippocampus abundant transcript-like protein 1

    See identical proteins and their annotated locations for NP_115947.2

    Status: VALIDATED

    Source sequence(s)
    AL358232, BC106062, BU507687, BX359483
    Consensus CDS
    CCDS6710.2
    UniProtKB/Swiss-Prot
    Q5SR56
    Related
    ENSP00000364493.3, ENST00000375344.8
    Conserved Domains (2) summary
    cd06174
    Location:48450
    MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
    pfam07690
    Location:49394
    MFS_1; Major Facilitator Superfamily

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p13 Primary Assembly

    Range
    94374327..94461042
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011519114.2XP_011517416.1  hippocampus abundant transcript-like protein 1 isoform X1

    Conserved Domains (2) summary
    cd06174
    Location:18385
    MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
    pfam07690
    Location:18329
    MFS_1; Major Facilitator Superfamily
  2. XM_017015221.1XP_016870710.1  hippocampus abundant transcript-like protein 1 isoform X4

    UniProtKB/Swiss-Prot
    Q5SR56
    Conserved Domains (2) summary
    cd06174
    Location:18278
    MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
    pfam07690
    Location:18279
    MFS_1; Major Facilitator Superfamily
  3. XM_017015220.1XP_016870709.1  hippocampus abundant transcript-like protein 1 isoform X3

    Conserved Domains (2) summary
    cd06174
    Location:84281
    MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
    pfam07690
    Location:1225
    MFS_1; Major Facilitator Superfamily
  4. XM_017015218.1XP_016870707.1  hippocampus abundant transcript-like protein 1 isoform X1

    Conserved Domains (2) summary
    cd06174
    Location:18385
    MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
    pfam07690
    Location:18329
    MFS_1; Major Facilitator Superfamily
  5. XM_017015219.2XP_016870708.1  hippocampus abundant transcript-like protein 1 isoform X2

  6. XM_017015217.2XP_016870706.1  hippocampus abundant transcript-like protein 1 isoform X1

    Conserved Domains (2) summary
    cd06174
    Location:18385
    MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
    pfam07690
    Location:18329
    MFS_1; Major Facilitator Superfamily

RNA

  1. XR_002956813.1 RNA Sequence

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