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GOLGA2P2Y GOLGA2 pseudogene 2 Y-linked [ Homo sapiens (human) ]

Gene ID: 84559, updated on 23-Nov-2021

Summary

Official Symbol
GOLGA2P2Yprovided by HGNC
Official Full Name
GOLGA2 pseudogene 2 Y-linkedprovided by HGNC
Primary source
HGNC:HGNC:16479
See related
Ensembl:ENSG00000239533 MIM:400035
Gene type
pseudo
RefSeq status
REVIEWED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
GOLGA2LY; GOLGA2P2; GOLGA2LY1
Summary
There are two copies of this pseudogene within the P1 palindrome on chromosome Y. This record represents the more centromeric copy. [provided by RefSeq, Jul 2008]
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Genomic context

See GOLGA2P2Y in Genome Data Viewer
Location:
Yq11.23
Exon count:
9
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) Y NC_000024.10 (24209967..24214831, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) Y NC_000024.9 (26356114..26360978, complement)

Chromosome Y - NC_000024.10Genomic Context describing neighboring genes Neighboring gene CSPG4 pseudogene 2 Y-linked Neighboring gene CSPG4 pseudogene 3 Y-linked Neighboring gene CHRFAM7A pseudogene 2 Neighboring gene RNA, 7SL, cytoplasmic 818, pseudogene Neighboring gene UBE2Q2 pseudogene 4, Y-linked Neighboring gene dynamin 1 pseudogene 25

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Phenotypes

Copy number response

Description
Copy number response
Haploinsufficency

No evidence available (Last evaluated 2012-08-22)

ClinGen Genome Curation Page
Triplosensitivity

No evidence available (Last evaluated 2012-08-22)

ClinGen Genome Curation Page

General gene information

Other Names

  • golgi autoantigen, golgin subfamily a, 2-like, Y-linked 1
  • golgin A2 pseudogene 2, Y-linked

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_004755.2 

    Range
    2399081..2403945 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
  2. NG_017010.1 RefSeqGene

    Range
    5001..9865
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. NR_001555.2 RNA Sequence

    Status: REVIEWED

    Source sequence(s)
    AC012005
    Related
    ENST00000398377.4

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000024.10 Reference GRCh38.p13 Primary Assembly

    Range
    24209967..24214831 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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