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MAK16 MAK16 homolog [ Homo sapiens (human) ]

Gene ID: 84549, updated on 3-May-2020

Summary

Official Symbol
MAK16provided by HGNC
Official Full Name
MAK16 homologprovided by HGNC
Primary source
HGNC:HGNC:13703
See related
Ensembl:ENSG00000198042
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RBM13; MAK16L
Expression
Ubiquitous expression in lymph node (RPKM 5.6), appendix (RPKM 5.5) and 25 other tissues See more
Orthologs

Genomic context

See MAK16 in Genome Data Viewer
Location:
8p12
Exon count:
10
Annotation release Status Assembly Chr Location
109.20200228 current GRCh38.p13 (GCF_000001405.39) 8 NC_000008.11 (33485182..33501262)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (33342685..33358778)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene fucosyltransferase 10 Neighboring gene RNA, U6 small nuclear 528, pseudogene Neighboring gene RNA binding motif protein 4 pseudogene Neighboring gene thymosin beta 4 X-linked pseudogene Neighboring gene TELO2 interacting protein 2 Neighboring gene small nucleolar RNA, C/D box 13

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
RNA binding HDA PubMed 
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
maturation of 5.8S rRNA IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
maturation of LSU-rRNA IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
intracellular membrane-bounded organelle IDA
Inferred from Direct Assay
more info
 
nucleolus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
nucleolus IDA
Inferred from Direct Assay
more info
 
preribosome, large subunit precursor IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
protein MAK16 homolog
Names
NNP78
RNA binding motif protein 13
RNA binding protein

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_032509.4NP_115898.2  protein MAK16 homolog

    See identical proteins and their annotated locations for NP_115898.2

    Status: VALIDATED

    Source sequence(s)
    AC091144, BC039740, BC050528, BP281245
    Consensus CDS
    CCDS6089.1
    UniProtKB/Swiss-Prot
    Q9BXY0
    Related
    ENSP00000353246.5, ENST00000360128.11
    Conserved Domains (1) summary
    PLN00040
    Location:1196
    PLN00040; Protein MAK16 homolog; Provisional

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p13 Primary Assembly

    Range
    33485182..33501262
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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