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KIAA1841 KIAA1841 [ Homo sapiens (human) ]

Gene ID: 84542, updated on 10-Dec-2019

Summary

Official Symbol
KIAA1841provided by HGNC
Official Full Name
KIAA1841provided by HGNC
Primary source
HGNC:HGNC:29387
See related
Ensembl:ENSG00000162929
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Ubiquitous expression in brain (RPKM 1.9), prostate (RPKM 1.7) and 24 other tissues See more
Orthologs

Genomic context

See KIAA1841 in Genome Data Viewer
Location:
2p15
Exon count:
25
Annotation release Status Assembly Chr Location
109.20191205 current GRCh38.p13 (GCF_000001405.39) 2 NC_000002.12 (61065870..61138034)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (61293005..61365169)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene pseudouridine synthase 10 Neighboring gene RNA, 5S ribosomal pseudogene 95 Neighboring gene peroxisomal biogenesis factor 13 Neighboring gene uncharacterized LOC105374759 Neighboring gene uncharacterized LOC339803 Neighboring gene uncharacterized LOC105374758 Neighboring gene chromosome 2 open reading frame 74

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Phenotypes

NHGRI GWAS Catalog

Description
A genome-wide scan of Ashkenazi Jewish Crohn's disease suggests novel susceptibility loci.
NHGRI GWA Catalog
Host-microbe interactions have shaped the genetic architecture of inflammatory bowel disease.
NHGRI GWA Catalog

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • MGC39557

General protein information

Preferred Names
uncharacterized protein KIAA1841

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001129993.3NP_001123465.1  uncharacterized protein KIAA1841 isoform a

    See identical proteins and their annotated locations for NP_001123465.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (a).
    Source sequence(s)
    AB058744, AL833595, CA421892, DA222969
    Consensus CDS
    CCDS46296.1
    UniProtKB/Swiss-Prot
    Q6NSI8
    Related
    ENSP00000385579.1, ENST00000402291.6
    Conserved Domains (1) summary
    pfam11822
    Location:147449
    DUF3342; Domain of unknown function (DUF3342)
  2. NM_001330432.1NP_001317361.1  uncharacterized protein KIAA1841 isoform c

    Status: VALIDATED

    Source sequence(s)
    AB058744, AI560205, AL833595, BC039298, CA421892, DA377414
    Consensus CDS
    CCDS82456.1
    UniProtKB/Swiss-Prot
    Q6NSI8
    Related
    ENSP00000482126.1, ENST00000612149.1
  3. NM_001330433.2NP_001317362.1  uncharacterized protein KIAA1841 isoform b

    Status: VALIDATED

    Source sequence(s)
    AC016747
    Consensus CDS
    CCDS1867.1
    UniProtKB/Swiss-Prot
    Q6NSI8
  4. NM_001330434.1NP_001317363.1  uncharacterized protein KIAA1841 isoform d

    Status: VALIDATED

    Source sequence(s)
    AC016747
    Conserved Domains (1) summary
    pfam11822
    Location:147404
    DUF3342; Domain of unknown function (DUF3342)
  5. NM_001330435.2NP_001317364.1  uncharacterized protein KIAA1841 isoform b

    Status: VALIDATED

    Source sequence(s)
    AC016747
    Consensus CDS
    CCDS1867.1
    UniProtKB/Swiss-Prot
    Q6NSI8
    Related
    ENSP00000349154.3, ENST00000356719.6
  6. NM_001330436.1NP_001317365.1  uncharacterized protein KIAA1841 isoform a

    Status: VALIDATED

    Source sequence(s)
    AC016747
    Consensus CDS
    CCDS46296.1
    UniProtKB/Swiss-Prot
    Q6NSI8
  7. NM_032506.3NP_115895.2  uncharacterized protein KIAA1841 isoform b

    See identical proteins and their annotated locations for NP_115895.2

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) differs in the 5' UTR, 3' UTR, and 3' coding region compared to variant 1. The resulting isoform (b) is shorter and has a distinct C-terminus compared to isoform a.
    Source sequence(s)
    AB058744, AW088127, BC070104, DB086916, DB090584
    Consensus CDS
    CCDS1867.1
    UniProtKB/Swiss-Prot
    Q6NSI8
    Related
    ENSP00000295031.5, ENST00000295031.9
    Conserved Domains (1) summary
    pfam11822
    Location:147449
    DUF3342; Domain of unknown function (DUF3342)

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p13 Primary Assembly

    Range
    61065870..61138034
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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