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ABLIM2 actin binding LIM protein family member 2 [ Homo sapiens (human) ]

Gene ID: 84448, updated on 12-Aug-2022

Summary

Official Symbol
ABLIM2provided by HGNC
Official Full Name
actin binding LIM protein family member 2provided by HGNC
Primary source
HGNC:HGNC:19195
See related
Ensembl:ENSG00000163995 MIM:612544; AllianceGenome:HGNC:19195
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Summary
Predicted to enable actin filament binding activity. Predicted to be involved in lamellipodium assembly. Predicted to act upstream of or within positive regulation of transcription by RNA polymerase II. Located in actin cytoskeleton. [provided by Alliance of Genome Resources, Apr 2022]
Expression
Broad expression in spleen (RPKM 7.8), brain (RPKM 4.6) and 16 other tissues See more
Orthologs
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Genomic context

See ABLIM2 in Genome Data Viewer
Location:
4p16.1
Exon count:
26
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (7965327..8158813, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (7943879..8137197, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (7967054..8160540, complement)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene actin filament associated protein 1 Neighboring gene Sharpr-MPRA regulatory region 14367 Neighboring gene uncharacterized LOC389199 Neighboring gene Sharpr-MPRA regulatory region 6491 Neighboring gene uncharacterized LOC124900657 Neighboring gene Sharpr-MPRA regulatory region 1176 Neighboring gene Sharpr-MPRA regulatory region 2931 Neighboring gene microRNA 95 Neighboring gene Sharpr-MPRA regulatory region 605 Neighboring gene guanine monophosphate synthase pseudogene 1 Neighboring gene SH3 domain and tetratricopeptide repeats 1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • FLJ26534, FLJ39684, KIAA1808, MGC141918, DKFZp761F129

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables actin filament binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 
involved_in actin cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 
involved_in lamellipodium assembly IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
is_active_in actin cytoskeleton IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in actin cytoskeleton IDA
Inferred from Direct Assay
more info
PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
actin-binding LIM protein 2
Names
abLIM-2
testis tissue sperm-binding protein Li 35a

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001130083.2NP_001123555.1  actin-binding LIM protein 2 isoform 1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1).
    Source sequence(s)
    AJ748601, AK094798, AK097003, BC067214, BE155865, BQ267829
    Consensus CDS
    CCDS47014.1
    UniProtKB/Swiss-Prot
    Q6H8Q1
    UniProtKB/TrEMBL
    A0A140VK02
    Related
    ENSP00000393511.2, ENST00000447017.7
    Conserved Domains (6) summary
    cd09327
    Location:2475
    LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
    cd09328
    Location:80135
    LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
    cd09329
    Location:153204
    LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
    cd09330
    Location:212267
    LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
    pfam02209
    Location:611645
    VHP; Villin headpiece domain
    pfam16182
    Location:277609
    AbLIM_anchor; Putative adherens-junction anchoring region of AbLIM
  2. NM_001130084.2NP_001123556.1  actin-binding LIM protein 2 isoform 2

    See identical proteins and their annotated locations for NP_001123556.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) lacks an alternate in-frame exon and uses an alternate in-frame splice site in the mid-coding region, compared to variant 1. The resulting isoform (2) is shorter than isoform 1.
    Source sequence(s)
    AJ748601, AK097003, BC067214, BQ267829
    Consensus CDS
    CCDS47013.1
    UniProtKB/Swiss-Prot
    Q6H8Q1, Q96JL7
    Related
    ENSP00000342813.5, ENST00000341937.9
    Conserved Domains (6) summary
    cd09327
    Location:2475
    LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
    cd09328
    Location:80135
    LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
    cd09329
    Location:153204
    LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
    cd09330
    Location:212267
    LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
    pfam02209
    Location:577611
    VHP; Villin headpiece domain
    pfam16182
    Location:277575
    AbLIM_anchor; Putative adherens-junction anchoring region of AbLIM
  3. NM_001130085.2NP_001123557.1  actin-binding LIM protein 2 isoform 3

    See identical proteins and their annotated locations for NP_001123557.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3) lacks an alternate in-frame exon and uses an alternate in-frame splice site in the mid-coding region, and lacks a segment in the 3' coding region, compared to variant 1. The resulting isoform (3) is shorter than isoform 1.
    Source sequence(s)
    AJ748600, AK097003, BC067214, BQ267829
    Consensus CDS
    CCDS47012.1
    UniProtKB/Swiss-Prot
    Q6H8Q1
    Related
    ENSP00000355003.5, ENST00000361581.9
    Conserved Domains (6) summary
    cd09327
    Location:2475
    LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
    cd09328
    Location:80135
    LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
    cd09329
    Location:153204
    LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
    cd09330
    Location:212267
    LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
    pfam02209
    Location:538572
    VHP; Villin headpiece domain
    pfam16182
    Location:277536
    AbLIM_anchor; Putative adherens-junction anchoring region of AbLIM
  4. NM_001130086.2NP_001123558.1  actin-binding LIM protein 2 isoform 4

    See identical proteins and their annotated locations for NP_001123558.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (4) lacks an alternate in-frame segment and uses an alternate in-frame splice site in the mid-coding region, compared to variant 1. The resulting isoform (4) is shorter than isoform 1.
    Source sequence(s)
    AJ748601, AK097003, BC067214, BQ267829, DQ413177
    Consensus CDS
    CCDS47011.1
    UniProtKB/Swiss-Prot
    Q6H8Q1
    Related
    ENSP00000421283.1, ENST00000505872.5
    Conserved Domains (6) summary
    cd09327
    Location:2475
    LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
    cd09328
    Location:80135
    LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
    cd09329
    Location:153204
    LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
    cd09330
    Location:212267
    LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
    pfam02209
    Location:525559
    VHP; Villin headpiece domain
    pfam16182
    Location:277523
    AbLIM_anchor; Putative adherens-junction anchoring region of AbLIM
  5. NM_001130087.2NP_001123559.1  actin-binding LIM protein 2 isoform 5

    Status: VALIDATED

    Description
    Transcript Variant: This variant (5) includes an alternate in-frame exon and uses an alternate in-frame splice site in the mid-coding region, and lacks alternate in-frame segments in both the mid- and 3' coding regions, compared to variant 1. The resulting isoform (5) is shorter than isoform 1.
    Source sequence(s)
    AK094754, AK094798, AK097003, BC067214, BQ267829
    Consensus CDS
    CCDS47015.1
    UniProtKB/Swiss-Prot
    Q6H8Q1
    Related
    ENSP00000354887.5, ENST00000361737.9
    Conserved Domains (6) summary
    cd09327
    Location:2475
    LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
    cd09328
    Location:80135
    LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
    cd09329
    Location:153204
    LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
    cd09330
    Location:212267
    LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
    pfam02209
    Location:497531
    VHP; Villin headpiece domain
    pfam16182
    Location:277495
    AbLIM_anchor; Putative adherens-junction anchoring region of AbLIM
  6. NM_001130088.2NP_001123560.1  actin-binding LIM protein 2 isoform 7

    Status: VALIDATED

    Description
    Transcript Variant: This variant (7) differs in the 3' UTR, includes an alternate in-frame exon and lacks an alternate in-frame segment in the mid-coding region, and lacks several exons in the 3' coding region, compared to variant 1. The resulting isoform (7) has a distinct C-terminus and is shorter than isoform 1.
    Source sequence(s)
    AK094798, BC067214, BM718728
    Consensus CDS
    CCDS47016.1
    UniProtKB/Swiss-Prot
    Q6H8Q1
    Related
    ENSP00000389410.2, ENST00000428004.6
    Conserved Domains (5) summary
    cd09327
    Location:2475
    LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
    cd09328
    Location:80135
    LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
    cd09329
    Location:153204
    LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
    cd09330
    Location:212267
    LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
    pfam16182
    Location:277428
    AbLIM_anchor; Putative adherens-junction anchoring region of AbLIM
  7. NM_001286688.2NP_001273617.1  actin-binding LIM protein 2 isoform 8

    See identical proteins and their annotated locations for NP_001273617.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (8) differs in the 5' UTR and coding sequence, contains an alternate in-frame exon, and lacks an alternate in-frame segment compared to variant 1. The resulting isoform (8) is shorter at the N-terminus, lacks an alternate segment, and contains another alternate segment compared to isoform 1.
    Source sequence(s)
    AK094798, AK097003, BQ267829, DA392726
    Consensus CDS
    CCDS68669.1
    UniProtKB/Swiss-Prot
    Q6H8Q1
    Related
    ENSP00000423661.1, ENST00000514025.5
    Conserved Domains (3) summary
    pfam02209
    Location:312346
    VHP; Villin headpiece domain
    pfam16182
    Location:34310
    AbLIM_anchor; Putative adherens-junction anchoring region of AbLIM
    cl02475
    Location:124
    LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers
  8. NM_032432.5NP_115808.3  actin-binding LIM protein 2 isoform 6

    See identical proteins and their annotated locations for NP_115808.3

    Status: VALIDATED

    Description
    Transcript Variant: This variant (6) lacks alternate in-frame segments in both the mid- and 3' coding regions, compared to variant 1. The resulting isoform (6) is shorter than isoform 1.
    Source sequence(s)
    AK094798, AK097003, BC067214, BC122567, BQ267829
    Consensus CDS
    CCDS54719.1
    UniProtKB/Swiss-Prot
    Q6H8Q1
    Related
    ENSP00000384658.3, ENST00000407564.7
    Conserved Domains (6) summary
    cd09327
    Location:2475
    LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
    cd09328
    Location:80135
    LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
    cd09329
    Location:153204
    LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
    cd09330
    Location:212267
    LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
    pfam02209
    Location:487521
    VHP; Villin headpiece domain
    pfam16182
    Location:277485
    AbLIM_anchor; Putative adherens-junction anchoring region of AbLIM

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

    Range
    7965327..8158813 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047416308.1XP_047272264.1  actin-binding LIM protein 2 isoform X12

  2. XM_047416301.1XP_047272257.1  actin-binding LIM protein 2 isoform X5

  3. XM_047416299.1XP_047272255.1  actin-binding LIM protein 2 isoform X3

  4. XM_005248030.5XP_005248087.1  actin-binding LIM protein 2 isoform X40

    Conserved Domains (6) summary
    cd09327
    Location:2980
    LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
    cd09328
    Location:85140
    LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
    cd09329
    Location:158209
    LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
    cd09330
    Location:217272
    LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
    pfam02209
    Location:491525
    VHP; Villin headpiece domain
    pfam16182
    Location:282489
    AbLIM_anchor; Putative adherens-junction anchoring region of AbLIM
  5. XM_005248027.5XP_005248084.1  actin-binding LIM protein 2 isoform X34

    Conserved Domains (6) summary
    cd09327
    Location:2980
    LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
    cd09328
    Location:85140
    LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
    cd09329
    Location:158209
    LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
    cd09330
    Location:217272
    LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
    pfam02209
    Location:530564
    VHP; Villin headpiece domain
    pfam16182
    Location:282528
    AbLIM_anchor; Putative adherens-junction anchoring region of AbLIM
  6. XM_005248029.5XP_005248086.1  actin-binding LIM protein 2 isoform X38

    Conserved Domains (6) summary
    cd09327
    Location:2980
    LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
    cd09328
    Location:85140
    LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
    cd09329
    Location:158209
    LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
    cd09330
    Location:217272
    LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
    pfam02209
    Location:492526
    VHP; Villin headpiece domain
    pfam16182
    Location:282490
    AbLIM_anchor; Putative adherens-junction anchoring region of AbLIM
  7. XM_005248024.5XP_005248081.1  actin-binding LIM protein 2 isoform X32

    Conserved Domains (6) summary
    cd09327
    Location:2980
    LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
    cd09328
    Location:85140
    LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
    cd09329
    Location:158209
    LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
    cd09330
    Location:217272
    LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
    pfam02209
    Location:543577
    VHP; Villin headpiece domain
    pfam16182
    Location:282541
    AbLIM_anchor; Putative adherens-junction anchoring region of AbLIM
  8. XM_005248022.5XP_005248079.1  actin-binding LIM protein 2 isoform X28

    Related
    ENSP00000504601.1, ENST00000676532.1
    Conserved Domains (6) summary
    cd09327
    Location:2980
    LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
    cd09328
    Location:85140
    LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
    cd09329
    Location:158209
    LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
    cd09330
    Location:217272
    LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
    pfam02209
    Location:582616
    VHP; Villin headpiece domain
    pfam16182
    Location:282580
    AbLIM_anchor; Putative adherens-junction anchoring region of AbLIM
  9. XM_047416307.1XP_047272263.1  actin-binding LIM protein 2 isoform X11

  10. XM_047416306.1XP_047272262.1  actin-binding LIM protein 2 isoform X10

  11. XM_017008715.3XP_016864204.1  actin-binding LIM protein 2 isoform X31

  12. XM_005248023.5XP_005248080.1  actin-binding LIM protein 2 isoform X29

    Conserved Domains (6) summary
    cd09327
    Location:2980
    LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
    cd09328
    Location:85140
    LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
    cd09329
    Location:158209
    LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
    cd09330
    Location:217272
    LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
    pfam02209
    Location:576610
    VHP; Villin headpiece domain
    pfam16182
    Location:282574
    AbLIM_anchor; Putative adherens-junction anchoring region of AbLIM
  13. XM_005248020.5XP_005248077.1  actin-binding LIM protein 2 isoform X22

    Conserved Domains (6) summary
    cd09327
    Location:2980
    LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
    cd09328
    Location:85140
    LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
    cd09329
    Location:158209
    LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
    cd09330
    Location:217272
    LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
    pfam02209
    Location:615649
    VHP; Villin headpiece domain
    pfam16182
    Location:282613
    AbLIM_anchor; Putative adherens-junction anchoring region of AbLIM
  14. XM_047416310.1XP_047272266.1  actin-binding LIM protein 2 isoform X14

  15. XM_005248019.5XP_005248076.1  actin-binding LIM protein 2 isoform X21

    UniProtKB/TrEMBL
    F5GYR0
    Related
    ENSP00000441255.3, ENST00000545242.6
    Conserved Domains (6) summary
    cd09327
    Location:2980
    LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
    cd09328
    Location:85140
    LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
    cd09329
    Location:158209
    LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
    cd09330
    Location:217272
    LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
    pfam02209
    Location:616650
    VHP; Villin headpiece domain
    pfam16182
    Location:282614
    AbLIM_anchor; Putative adherens-junction anchoring region of AbLIM
  16. XM_047416309.1XP_047272265.1  actin-binding LIM protein 2 isoform X13

  17. XM_047416300.1XP_047272256.1  actin-binding LIM protein 2 isoform X4

  18. XM_006713927.4XP_006713990.1  actin-binding LIM protein 2 isoform X37

    Conserved Domains (6) summary
    cd09327
    Location:2980
    LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
    cd09328
    Location:85140
    LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
    cd09329
    Location:158209
    LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
    cd09330
    Location:217272
    LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
    pfam02209
    Location:502536
    VHP; Villin headpiece domain
    pfam16182
    Location:282500
    AbLIM_anchor; Putative adherens-junction anchoring region of AbLIM
  19. XM_017008720.3XP_016864209.1  actin-binding LIM protein 2 isoform X33

  20. XM_005248028.6XP_005248085.1  actin-binding LIM protein 2 isoform X36

    Conserved Domains (6) summary
    cd09327
    Location:2980
    LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
    cd09328
    Location:85140
    LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
    cd09329
    Location:158209
    LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
    cd09330
    Location:217272
    LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
    pfam02209
    Location:503537
    VHP; Villin headpiece domain
    pfam16182
    Location:282501
    AbLIM_anchor; Putative adherens-junction anchoring region of AbLIM
  21. XM_047416316.1XP_047272272.1  actin-binding LIM protein 2 isoform X30

  22. XM_047416311.1XP_047272267.1  actin-binding LIM protein 2 isoform X15

  23. XM_047416313.1XP_047272269.1  actin-binding LIM protein 2 isoform X17

  24. XM_047416312.1XP_047272268.1  actin-binding LIM protein 2 isoform X16

  25. XM_047416302.1XP_047272258.1  actin-binding LIM protein 2 isoform X6

  26. XM_006713925.4XP_006713988.1  actin-binding LIM protein 2 isoform X25

    Conserved Domains (6) summary
    cd09327
    Location:2980
    LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
    cd09328
    Location:85140
    LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
    cd09329
    Location:158209
    LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
    cd09330
    Location:217272
    LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
    pfam02209
    Location:587621
    VHP; Villin headpiece domain
    pfam16182
    Location:282585
    AbLIM_anchor; Putative adherens-junction anchoring region of AbLIM
  27. XM_006713924.5XP_006713987.1  actin-binding LIM protein 2 isoform X20

    Conserved Domains (6) summary
    cd09327
    Location:2980
    LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
    cd09328
    Location:85140
    LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
    cd09329
    Location:158209
    LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
    cd09330
    Location:217272
    LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
    pfam02209
    Location:626660
    VHP; Villin headpiece domain
    pfam16182
    Location:282624
    AbLIM_anchor; Putative adherens-junction anchoring region of AbLIM
  28. XM_047416305.1XP_047272261.1  actin-binding LIM protein 2 isoform X9

  29. XM_005248021.6XP_005248078.1  actin-binding LIM protein 2 isoform X24

    Conserved Domains (6) summary
    cd09327
    Location:2980
    LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
    cd09328
    Location:85140
    LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
    cd09329
    Location:158209
    LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
    cd09330
    Location:217272
    LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
    pfam02209
    Location:588622
    VHP; Villin headpiece domain
    pfam16182
    Location:282586
    AbLIM_anchor; Putative adherens-junction anchoring region of AbLIM
  30. XM_047416303.1XP_047272259.1  actin-binding LIM protein 2 isoform X7

  31. XM_006713923.5XP_006713986.1  actin-binding LIM protein 2 isoform X19

    Conserved Domains (6) summary
    cd09327
    Location:2980
    LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
    cd09328
    Location:85140
    LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
    cd09329
    Location:158209
    LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
    cd09330
    Location:217272
    LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
    pfam02209
    Location:627661
    VHP; Villin headpiece domain
    pfam16182
    Location:282625
    AbLIM_anchor; Putative adherens-junction anchoring region of AbLIM
  32. XM_047416298.1XP_047272254.1  actin-binding LIM protein 2 isoform X2

  33. XM_005248017.5XP_005248074.1  actin-binding LIM protein 2 isoform X18

    Conserved Domains (6) summary
    cd09327
    Location:2980
    LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
    cd09328
    Location:85140
    LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
    cd09329
    Location:158209
    LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
    cd09330
    Location:217272
    LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
    pfam02209
    Location:628662
    VHP; Villin headpiece domain
    pfam16182
    Location:282626
    AbLIM_anchor; Putative adherens-junction anchoring region of AbLIM
  34. XM_005248014.6XP_005248071.1  actin-binding LIM protein 2 isoform X8

    Conserved Domains (6) summary
    cd09327
    Location:2980
    LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
    cd09328
    Location:85140
    LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
    cd09329
    Location:158209
    LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
    cd09330
    Location:217272
    LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
    pfam02209
    Location:667701
    VHP; Villin headpiece domain
    pfam16182
    Location:282665
    AbLIM_anchor; Putative adherens-junction anchoring region of AbLIM
  35. XM_047416297.1XP_047272253.1  actin-binding LIM protein 2 isoform X1

  36. XM_047416315.1XP_047272271.1  actin-binding LIM protein 2 isoform X27

  37. XM_047416314.1XP_047272270.1  actin-binding LIM protein 2 isoform X26

  38. XM_011513586.4XP_011511888.1  actin-binding LIM protein 2 isoform X23

    Conserved Domains (5) summary
    cd09327
    Location:2980
    LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
    cd09328
    Location:85140
    LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
    cd09329
    Location:158209
    LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
    cd09330
    Location:217272
    LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
    pfam16182
    Location:282472
    AbLIM_anchor; Putative adherens-junction anchoring region of AbLIM
  39. XM_047416318.1XP_047272274.1  actin-binding LIM protein 2 isoform X43

  40. XM_017008725.2XP_016864214.1  actin-binding LIM protein 2 isoform X42

  41. XM_047416317.1XP_047272273.1  actin-binding LIM protein 2 isoform X39

  42. XM_017008723.2XP_016864212.1  actin-binding LIM protein 2 isoform X35

  43. XM_005248031.5XP_005248088.1  actin-binding LIM protein 2 isoform X41

    Conserved Domains (5) summary
    cd09327
    Location:2980
    LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
    cd09328
    Location:85140
    LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
    cd09329
    Location:158209
    LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
    cd09330
    Location:217272
    LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
    pfam16182
    Location:282433
    AbLIM_anchor; Putative adherens-junction anchoring region of AbLIM

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060928.1 Alternate T2T-CHM13v2.0

    Range
    7943879..8137197 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)