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TMEM164 transmembrane protein 164 [ Homo sapiens (human) ]

Gene ID: 84187, updated on 12-Oct-2019

Summary

Official Symbol
TMEM164provided by HGNC
Official Full Name
transmembrane protein 164provided by HGNC
Primary source
HGNC:HGNC:26217
See related
Ensembl:ENSG00000157600
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
bB360B22.3
Expression
Ubiquitous expression in lung (RPKM 5.4), fat (RPKM 5.2) and 25 other tissues See more
Orthologs

Genomic context

See TMEM164 in Genome Data Viewer
Location:
Xq23
Exon count:
14
Annotation release Status Assembly Chr Location
109.20190905 current GRCh38.p13 (GCF_000001405.39) X NC_000023.11 (110002413..110184251)
105 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (109245641..109421016)

Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene acyl-CoA synthetase long chain family member 4 Neighboring gene uncharacterized LOC105373311 Neighboring gene ribosomal protein S5 pseudogene 7 Neighboring gene microRNA 652 Neighboring gene microRNA 3978 Neighboring gene uncharacterized LOC101928589 Neighboring gene AMMECR nuclear protein 1 Neighboring gene small nucleolar RNA, C/D box 96B Neighboring gene uncharacterized LOC105373312

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • FLJ20173, FLJ22679

Gene Ontology Provided by GOA

Component Evidence Code Pubs
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
transmembrane protein 164
Names
RP13-360B22.2

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001353849.2NP_001340778.1  transmembrane protein 164 isoform b

    Status: VALIDATED

    Source sequence(s)
    AL359079, AL360224
    Consensus CDS
    CCDS14550.2
    Conserved Domains (1) summary
    pfam14808
    Location:10273
    TMEM164; TMEM164 family
  2. NM_001353850.2NP_001340779.1  transmembrane protein 164 isoform c

    Status: VALIDATED

    Source sequence(s)
    AL359079, AL360224
    Conserved Domains (1) summary
    pfam14808
    Location:1146
    TMEM164; TMEM164 family
  3. NM_001353851.1NP_001340780.1  transmembrane protein 164 isoform c

    Status: VALIDATED

    Source sequence(s)
    AL359079, AL360224, BU681952
    Conserved Domains (1) summary
    pfam14808
    Location:1146
    TMEM164; TMEM164 family
  4. NM_017698.2NP_060168.2  transmembrane protein 164 isoform a precursor

    See identical proteins and their annotated locations for NP_060168.2

    Status: VALIDATED

    Source sequence(s)
    AK094127, AL359079, BU681952, CN349076
    Consensus CDS
    CCDS55475.1
    UniProtKB/Swiss-Prot
    Q5U3C3
    Related
    ENSP00000384075.2, ENST00000372072.7
    Conserved Domains (1) summary
    pfam14808
    Location:1124
    TMEM164; TMEM164 family
  5. NM_032227.4NP_115603.2  transmembrane protein 164 isoform b

    See identical proteins and their annotated locations for NP_115603.2

    Status: VALIDATED

    Source sequence(s)
    AL359079, BC085605, BP295095, BU681952
    Consensus CDS
    CCDS14550.2
    UniProtKB/Swiss-Prot
    Q5U3C3
    Related
    ENSP00000361138.2, ENST00000372068.7
    Conserved Domains (1) summary
    pfam14808
    Location:10273
    TMEM164; TMEM164 family

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109.20190905

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000023.11 Reference GRCh38.p13 Primary Assembly

    Range
    110002413..110184251
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017029898.1XP_016885387.1  transmembrane protein 164 isoform X6

  2. XM_017029895.1XP_016885384.1  transmembrane protein 164 isoform X4

    Conserved Domains (1) summary
    pfam14808
    Location:10130
    TMEM164; TMEM164 family
  3. XM_017029900.1XP_016885389.1  transmembrane protein 164 isoform X8

    Conserved Domains (1) summary
    pfam14808
    Location:2127
    TMEM164; TMEM164 family
  4. XM_011531055.2XP_011529357.1  transmembrane protein 164 isoform X9

    See identical proteins and their annotated locations for XP_011529357.1

    UniProtKB/Swiss-Prot
    Q5U3C3
    Conserved Domains (1) summary
    pfam14808
    Location:1124
    TMEM164; TMEM164 family
  5. XM_005262205.4XP_005262262.1  transmembrane protein 164 isoform X1

    See identical proteins and their annotated locations for XP_005262262.1

    UniProtKB/Swiss-Prot
    Q5U3C3
    Related
    ENSP00000361143.1, ENST00000372073.5
    Conserved Domains (1) summary
    pfam14808
    Location:10273
    TMEM164; TMEM164 family
  6. XM_017029899.1XP_016885388.1  transmembrane protein 164 isoform X7

    Conserved Domains (1) summary
    pfam14808
    Location:1146
    TMEM164; TMEM164 family
  7. XM_011531054.1XP_011529356.1  transmembrane protein 164 isoform X9

    See identical proteins and their annotated locations for XP_011529356.1

    UniProtKB/Swiss-Prot
    Q5U3C3
    Conserved Domains (1) summary
    pfam14808
    Location:1124
    TMEM164; TMEM164 family
  8. XM_005262208.5XP_005262265.1  transmembrane protein 164 isoform X2

    Conserved Domains (1) summary
    pfam14808
    Location:28171
    TMEM164; TMEM164 family
  9. XM_017029897.1XP_016885386.1  transmembrane protein 164 isoform X5

  10. XM_017029894.2XP_016885383.1  transmembrane protein 164 isoform X3

    Conserved Domains (1) summary
    pfam14808
    Location:12154
    TMEM164; TMEM164 family
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