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indigoidine synthase A family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 841473, updated on 30-Jul-2025
Official Full Name
indigoidine synthase A family protein
Primary source
TAIR:AT1G50510
Locus tag
AT1G50510
See related
Araport:AT1G50510
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F11F12.14
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Location:
chromosome: 1
Exon count:
13
Sequence:
Chromosome: 1; NC_003070.9 (18716112..18719336)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene F-box associated ubiquitination effector family protein Neighboring gene 10-formyltetrahydrofolate synthetase Neighboring gene ubiquitin-conjugating enzyme 20 Neighboring gene Membrane trafficking VPS53 family protein Neighboring gene cytochrome P450, family 705, subfamily A, polypeptide 27 Neighboring gene uncharacterized protein Neighboring gene miscRNA

Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. A Kinase and a Glycosylase Catabolize Pseudouridine in the Peroxisome to Prevent Toxic Pseudouridine Monophosphate Accumulation. Chen M, et al. Plant Cell, 2020 Mar. PMID 31907295, Free PMC Article
  2. In-depth proteome analysis of Arabidopsis leaf peroxisomes combined with in vivo subcellular targeting verification indicates novel metabolic and regulatory functions of peroxisomes. Reumann S, et al. Plant Physiol, 2009 May. PMID 19329564, Free PMC Article
  3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

NM_103934.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables RNA glycosylase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables pseudouridylate synthase activity IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
located_in peroxisome IDA
Inferred from Direct Assay
more info
 PubMed 
Preferred Names
indigoidine synthase A family protein
NP_564574.2
  • indigoidine synthase A family protein; INVOLVED IN: biological_process unknown; LOCATED IN: peroxisome, plasma membrane; CONTAINS InterPro DOMAIN/s: Indigoidine synthase A like protein (InterPro:IPR007342); Has 1680 Blast hits to 1674 proteins in 598 species: Archae - 0; Bacteria - 980; Metazoa - 68; Fungi - 108; Plants - 51; Viruses - 0; Other Eukaryotes - 473 (source: NCBI BLink).

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    18716112..18719336
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_103934.5 → NP_564574.2  indigoidine synthase A family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_564574.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q84K35, Q9LPS4
    UniProtKB/TrEMBL
    A0A178WKH3, A0A654EMB6
    Conserved Domains (1) summary
    pfam04227
    Location:36 → 325
    Indigoidine_A; Indigoidine synthase A like protein
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q84K35.1

Gene LinkOut

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