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AT1G49700 Plant protein 1589 of unknown function [ Arabidopsis thaliana (thale cress) ]

Gene ID: 841393, updated on 22-Feb-2019

Summary

Gene symbol
AT1G49700
Gene description
Plant protein 1589 of unknown function
Primary source
Araport:AT1G49700
Locus tag
AT1G49700
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F14J22.9; F14J22_9

Genomic context

See AT1G49700 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
7
Sequence:
Chromosome: 1; NC_003070.9 (18388792..18390523, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene tRNA Neighboring gene miscRNA Neighboring gene fucosyltransferase 12 Neighboring gene miscRNA

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
mitochondrion ISM
Inferred from Sequence Model
more info
 

General protein information

Preferred Names
Plant protein 1589 of unknown function
NP_001154413.2
  • Plant protein 1589 of unknown function; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP01589, plant (InterPro:IPR006476); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G07675.1); Has 180 Blast hits to 180 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 173; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).
NP_175392.5
  • Plant protein 1589 of unknown function; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP01589, plant (InterPro:IPR006476); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G07675.1); Has 177 Blast hits to 177 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 173; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    18388792..18390523 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001160941.2NP_001154413.2  Plant protein 1589 of unknown function [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001154413.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    F4I3C5
    Conserved Domains (1) summary
    pfam09713
    Location:1867
    A_thal_3526; Plant protein 1589 of unknown function (A_thal_3526)
  2. NM_103857.5NP_175392.5  Plant protein 1589 of unknown function [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_175392.5

    Status: REVIEWED

    UniProtKB/TrEMBL
    F4I3C6
    Conserved Domains (1) summary
    pfam09713
    Location:1867
    A_thal_3526; Plant protein 1589 of unknown function (A_thal_3526)
  3. NM_001333398.1NP_001322681.1  Plant protein 1589 of unknown function [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AUS7
  4. NM_001333399.1NP_001322682.1  Plant protein 1589 of unknown function [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AUP3
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