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SLC7A6OS solute carrier family 7 member 6 opposite strand [ Homo sapiens (human) ]

Gene ID: 84138, updated on 7-Oct-2018

Summary

Official Symbol
SLC7A6OSprovided by HGNC
Official Full Name
solute carrier family 7 member 6 opposite strandprovided by HGNC
Primary source
HGNC:HGNC:25807
See related
Ensembl:ENSG00000103061 Vega:OTTHUMG00000137558
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Ubiquitous expression in fat (RPKM 16.2), lymph node (RPKM 14.6) and 25 other tissues See more
Orthologs

Genomic context

See SLC7A6OS in Genome Data Viewer
Location:
16q22.1
Exon count:
5
Annotation release Status Assembly Chr Location
109 current GRCh38.p12 (GCF_000001405.38) 16 NC_000016.10 (68300615..68310965, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 16 NC_000016.9 (68318043..68344868, complement)

Chromosome 16 - NC_000016.10Genomic Context describing neighboring genes Neighboring gene phospholipase A2 group XV Neighboring gene solute carrier family 7 member 6 Neighboring gene RNA, U6 small nuclear 1262, pseudogene Neighboring gene protein arginine methyltransferase 7 Neighboring gene RNA, U4 small nuclear 30, pseudogene Neighboring gene sphingomyelin phosphodiesterase 3

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Jun 15 11:32:44 2016

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • FLJ13291

Gene Ontology Provided by GOA

Process Evidence Code Pubs
developmental process IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
hematopoietic progenitor cell differentiation IEA
Inferred from Electronic Annotation
more info
 
protein transport IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
cytoplasm IEA
Inferred from Electronic Annotation
more info
 
nucleus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
probable RNA polymerase II nuclear localization protein SLC7A6OS
Names
ADAMS proteinase-related protein
protein SLC7A6OS
solute carrier family 7 member 6 opposite strand transcript

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_032178.2NP_115554.2  probable RNA polymerase II nuclear localization protein SLC7A6OS

    See identical proteins and their annotated locations for NP_115554.2

    Status: VALIDATED

    Source sequence(s)
    AK023353, AY078070, BC013778, DB145613
    Consensus CDS
    CCDS10865.1
    UniProtKB/Swiss-Prot
    Q96CW6
    Related
    ENSP00000263997.5, OTTHUMP00000174865, ENST00000263997.10, OTTHUMT00000268894
    Conserved Domains (1) summary
    pfam08574
    Location:194257
    DUF1762; Protein of unknown function (DUF1762)

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p12 Primary Assembly

Genomic

  1. NC_000016.10 Reference GRCh38.p12 Primary Assembly

    Range
    68300615..68310965 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011523372.3XP_011521674.1  probable RNA polymerase II nuclear localization protein SLC7A6OS isoform X1

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