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PEX11A peroxin 11A [ Arabidopsis thaliana (thale cress) ]

Gene ID: 841186, updated on 21-Oct-2022

Summary

Gene symbol
PEX11A
Gene description
peroxin 11A
Primary source
Araport:AT1G47750
Locus tag
AT1G47750
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
peroxin 11A; T2E6.18; T2E6_18
Summary
member of the peroxin11 (PEX11) gene family, integral to peroxisome membrane, controls peroxisome proliferation.
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Genomic context

See PEX11A in Genome Data Viewer
Location:
chromosome: 1
Exon count:
1
Sequence:
Chromosome: 1; NC_003070.9 (17569256..17570249, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Primosome PriB/single-strand DNA-binding protein Neighboring gene F-box and associated interaction domains-containing protein Neighboring gene PPPDE putative thiol peptidase family protein Neighboring gene AGAMOUS-like 102 Neighboring gene F-box and associated interaction domains-containing protein

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

NM_103668.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables identical protein binding IDA
Inferred from Direct Assay
more info
PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within peroxisome fission IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within peroxisome organization IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
 
located_in peroxisomal membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in peroxisome IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
peroxin 11A
NP_564514.1
  • peroxin 11A (PEX11A); CONTAINS InterPro DOMAIN/s: Peroxisomal biogenesis factor 11 (InterPro:IPR008733); BEST Arabidopsis thaliana protein match is: peroxin 11B (TAIR:AT3G47430.1); Has 271 Blast hits to 271 proteins in 59 species: Archae - 0; Bacteria - 0; Metazoa - 49; Fungi - 15; Plants - 188; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    17569256..17570249 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_103668.3NP_564514.1  peroxin 11A [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_564514.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8LGI6, Q9FZF1
    Conserved Domains (1) summary
    pfam05648
    Location:18245
    PEX11; Peroxisomal biogenesis factor 11 (PEX11)