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seven transmembrane domain protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 841173, updated on 18-Sep-2024

Summary

Official Full Name
seven transmembrane domain protein
Primary source
TAIR:AT1G47640
Locus tag
AT1G47640
See related
Araport:AT1G47640
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F16N3.6; F16N3_6
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Genomic context

Location:
chromosome: 1
Exon count:
6
Sequence:
Chromosome: 1; NC_003070.9 (17518047..17520129, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene miscRNA Neighboring gene miscRNA Neighboring gene pseudo Neighboring gene Dof-type zinc finger DNA-binding family protein

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General protein information

Preferred Names
seven transmembrane domain protein
NP_564509.1
  • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2053, membrane (InterPro:IPR019164); Has 204 Blast hits to 204 proteins in 84 species: Archae - 0; Bacteria - 0; Metazoa - 127; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    17518047..17520129 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_103657.6NP_564509.1  seven transmembrane domain protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_564509.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178WKH7, Q9SX96
    Conserved Domains (1) summary
    pfam09767
    Location:2161
    DUF2053; Predicted membrane protein (DUF2053)