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AT1G30860 RING/U-box superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 839970, updated on 22-Feb-2019

Summary

Gene symbol
AT1G30860
Gene description
RING/U-box superfamily protein
Primary source
Araport:AT1G30860
Locus tag
AT1G30860
Gene type
protein coding
RNA name
RING/U-box superfamily protein
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T17H7.18

Genomic context

See AT1G30860 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
5
Sequence:
Chromosome: 1; NC_003070.9 (10986496..10989593, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene root hair specific 4 Neighboring gene Peroxidase superfamily protein Neighboring gene hypothetical protein Neighboring gene Integral membrane HRF1 family protein

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General protein information

Preferred Names
RING/U-box superfamily protein
NP_174371.2
  • RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: stem, stamen, pollen tube; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G34920.1); Has 4912 Blast hits to 4241 proteins in 362 species: Archae - 9; Bacteria - 172; Metazoa - 2090; Fungi - 292; Plants - 512; Viruses - 97; Other Eukaryotes - 1740 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    10986496..10989593 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_102823.4NP_174371.2  RING/U-box superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_174371.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q6NQ80
    Conserved Domains (1) summary
    pfam13920
    Location:673721
    zf-C3HC4_3; Zinc finger, C3HC4 type (RING finger)
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