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GRF12 general regulatory factor 12 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 839189, updated on 18-Nov-2018

Summary

Gene symbol
GRF12
Gene description
general regulatory factor 12
Primary source
Araport:AT1G26480
Locus tag
AT1G26480
Gene type
protein coding
RNA name
general regulatory factor 12
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
general regulatory factor 12; GF14 IOTA; T1K7.15; T1K7_15
Summary
14-3-3 protein GF14iota (grf12)

Genomic context

See GRF12 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
7
Sequence:
Chromosome: 1; NC_003070.9 (9156279..9158093, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Carbohydrate-binding X8 domain superfamily protein Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein Neighboring gene chromatin modification-like protein Neighboring gene tRNA Neighboring gene Pentatricopeptide repeat (PPR) superfamily protein Neighboring gene ncRNA

Pathways from BioSystems

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

NM_102411.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
protein phosphorylated amino acid binding TAS
Traceable Author Statement
more info
PubMed 
Component Evidence Code Pubs
cytoplasm IEA
Inferred from Electronic Annotation
more info
 
cytoplasm ISM
Inferred from Sequence Model
more info
 
nucleus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
general regulatory factor 12
NP_564249.1
  • general regulatory factor 12 (GRF12); FUNCTIONS IN: protein phosphorylated amino acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: 14-3-3 protein (InterPro:IPR000308); BEST Arabidopsis thaliana protein match is: general regulatory factor 9 (TAIR:AT2G42590.3); Has 2719 Blast hits to 2708 proteins in 388 species: Archae - 0; Bacteria - 8; Metazoa - 1259; Fungi - 334; Plants - 765; Viruses - 0; Other Eukaryotes - 353 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    9156279..9158093 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_102411.3NP_564249.1  general regulatory factor 12 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_564249.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9C5W6
    UniProtKB/TrEMBL
    A0A178WJF9
    Conserved Domains (1) summary
    pfam00244
    Location:14240
    14-3-3; 14-3-3 protein
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