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AT1G24360 NAD(P)-binding Rossmann-fold superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 839053, updated on 18-Apr-2019

Summary

Gene symbol
AT1G24360
Gene description
NAD(P)-binding Rossmann-fold superfamily protein
Primary source
Araport:AT1G24360
Locus tag
AT1G24360
Gene type
protein coding
RNA name
NAD(P)-binding Rossmann-fold superfamily protein
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F21J9.2

Genomic context

See AT1G24360 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
11
Sequence:
Chromosome: 1; NC_003070.9 (8640582..8643503)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ARM repeat superfamily protein Neighboring gene FAD/NAD(P)-binding oxidoreductase family protein Neighboring gene Acid phosphatase/vanadium-dependent haloperoxidase-related protein Neighboring gene hypothetical protein Neighboring gene no-apical-meristem-associated carboxy-terminal domain protein

Pathways from BioSystems

General gene information

Homology

NM_102282.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
copper ion binding IDA
Inferred from Direct Assay
more info
PubMed 
oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Process Evidence Code Pubs
fatty acid elongation IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
oxidation-reduction process IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
chloroplast IDA
Inferred from Direct Assay
more info
PubMed 
chloroplast ISM
Inferred from Sequence Model
more info
 
chloroplast envelope IDA
Inferred from Direct Assay
more info
PubMed 
chloroplast stroma IDA
Inferred from Direct Assay
more info
PubMed 
plastid IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
NAD(P)-binding Rossmann-fold superfamily protein
NP_564216.1
  • NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: 3-oxoacyl-[acyl-carrier-protein] reductase activity, copper ion binding; INVOLVED IN: oxidation reduction, metabolic process, fatty acid biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: 3-oxoacyl-(acyl-carrier-protein) reductase (InterPro:IPR011284), Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G29370.1); Has 133396 Blast hits to 132816 proteins in 3924 species: Archae - 1008; Bacteria - 83642; Metazoa - 7884; Fungi - 7548; Plants - 3127; Viruses - 5; Other Eukaryotes - 30182 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    8640582..8643503
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_102282.4NP_564216.1  NAD(P)-binding Rossmann-fold superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_564216.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P33207
    Conserved Domains (2) summary
    cd05333
    Location:78316
    BKR_SDR_c; beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs
    TIGR01830
    Location:79318
    3oxo_ACP_reduc; 3-oxoacyl-(acyl-carrier-protein) reductase
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