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TTTY14 testis-specific transcript, Y-linked 14 [ Homo sapiens (human) ]

Gene ID: 83869, updated on 25-Jan-2022

Summary

Official Symbol
TTTY14provided by HGNC
Official Full Name
testis-specific transcript, Y-linked 14provided by HGNC
Primary source
HGNC:HGNC:18495
See related
Ensembl:ENSG00000176728 AllianceGenome:HGNC:18495
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
TTY14; CYorf14; PRO2834; NCRNA00137; NCRNA00185
Expression
Low expression observed in reference dataset See more
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Genomic context

See TTTY14 in Genome Data Viewer
Location:
Yq11.222
Exon count:
11
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) Y NC_000024.10 (18872501..19077547, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) Y NC_000024.9 (21034387..21239433, complement)

Chromosome Y - NC_000024.10Genomic Context describing neighboring genes Neighboring gene OFD1 pseudogene 7 Y-linked Neighboring gene MT-CYB pseudogene 2 Neighboring gene zinc finger protein 839 pseudogene 1 Neighboring gene CD24 molecule pseudogene 4 Neighboring gene RNA, U6 small nuclear 255, pseudogene Neighboring gene glyceraldehyde 3 phosphate dehydrogenase pseudogene 19 Neighboring gene BCL-6 corepressor pseudogene Neighboring gene BCL6 corepressor pseudogene 1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Other Names

  • testis-specific transcript, Y-linked 14 (non-protein coding)

Clone Names

  • FLJ32550

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_001543.4 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (5) lacks three exons and its transcription extends past a splice site used in the variant 1, resulting in a shorter transcript.
    Source sequence(s)
    AC007244, AC009235, AI674196
  2. NR_125733.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant:
    Source sequence(s)
    AF119903, DA411985, FY211594, FY213451
  3. NR_125734.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) lacks two internal exons and contains an alternate internal exon, resulting in a shorter transcripts, compared to variant 1.
    Source sequence(s)
    AF119903, DA411985, FY211594
  4. NR_125735.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3) lacks three internal exons and contains an alternate internal exon, resulting in a shorter transcripts, compared to variant 1.
    Source sequence(s)
    AF119903, BX280014, DA411985
    Related
    ENST00000454875.2
  5. NR_125736.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (4) differs in the 5' terminal exon, lacks two internal exons and contains two alternate internal exons, resulting in a shorter transcripts, compared to variant 1.
    Source sequence(s)
    AF119903, BM750145, HY121109
    Related
    ENST00000670354.1
  6. NR_125737.2 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (6) differs in the 5' terminal exon, lacks two exons and its transcription extends past a splice site used in the variant 1, resulting in a shorter transcript.
    Source sequence(s)
    AI674196, BM750145
    Related
    ENST00000651286.1
  7. NR_158640.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC007244, AC009235
    Related
    ENST00000670243.1
  8. NR_158641.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC007244, AC009235

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000024.10 Reference GRCh38.p13 Primary Assembly

    Range
    18872501..19077547 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_031932.1: Suppressed sequence

    Description
    NM_031932.1: This RefSeq record was removed by NCBI staff. Contact info@ncbi.nlm.nih.gov for further information.
  2. NR_001544.2: Suppressed sequence

    Description
    NR_001544.2: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript.
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