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TTTY9A testis-specific transcript, Y-linked 9A [ Homo sapiens (human) ]

Gene ID: 83864, updated on 23-Nov-2021

Summary

Official Symbol
TTTY9Aprovided by HGNC
Official Full Name
testis-specific transcript, Y-linked 9Aprovided by HGNC
Primary source
HGNC:HGNC:18490
See related
Ensembl:ENSG00000242153
Gene type
ncRNA
RefSeq status
REVIEWED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
TTY9; TTTY9; NCRNA00131
Summary
This gene is transcribed but does not appear to encode a protein. Two identical copies of this gene are present in a palindromic region (P4) on chromosome Y. This record represents the more telomeric copy. [provided by RefSeq, Jul 2008]
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Genomic context

See TTTY9A in Genome Data Viewer
Location:
Yq11.222
Exon count:
5
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) Y NC_000024.10 (18729882..18739197)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) Y NC_000024.9 (20891768..20901083)

Chromosome Y - NC_000024.10Genomic Context describing neighboring genes Neighboring gene RAB9A, member RAS oncogene family pseudogene 4 Neighboring gene trafficking protein particle complex 2 pseudogene 7 Neighboring gene OFD1 pseudogene 6 Y-linked Neighboring gene heat shock transcription factor Y-linked 2 Neighboring gene glycoprotein M6B pseudogene 2 Neighboring gene USP9Y pseudogene 2

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Markers

Other Names

  • testis transcript Y 9
  • testis-specific transcript, Y-linked 9A (non-protein coding)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_004636.1 

    Range
    1213787..1223102
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. NR_001530.1 RNA Sequence

    Status: REVIEWED

    Source sequence(s)
    AC007379, BX279935
    Related
    ENST00000432335.1

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000024.10 Reference GRCh38.p13 Primary Assembly

    Range
    18729882..18739197
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_031927.1: Suppressed sequence

    Description
    NM_031927.1: This RefSeq record was removed by NCBI staff. Contact info@ncbi.nlm.nih.gov for further information.
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