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TTTY5 testis-specific transcript, Y-linked 5 [ Homo sapiens (human) ]

Gene ID: 83863, updated on 15-Sep-2022

Summary

Official Symbol
TTTY5provided by HGNC
Official Full Name
testis-specific transcript, Y-linked 5provided by HGNC
Primary source
HGNC:HGNC:16482
See related
Ensembl:ENSG00000215560 MIM:400038; AllianceGenome:HGNC:16482
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
TTY5; LINC00126; NCRNA00126
Summary
There is a single copy of this gene on chromosome Y at the center of the P3 palindrome. [provided by RefSeq, Jul 2008]
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Genomic context

Location:
Yq11.223
Exon count:
2
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) Y NC_000024.10 (22296798..22298876, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) Y NC_060948.1 (23123071..23125149)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) Y NC_000024.9 (24442945..24445023, complement)

Chromosome Y - NC_000024.10Genomic Context describing neighboring genes Neighboring gene RNA binding motif protein Y-linked family 2 member U, pseudogene Neighboring gene RNA binding motif protein Y-linked family 1 member K, pseudogene Neighboring gene testis specific protein Y-linked 22, pseudogene Neighboring gene RNA binding motif protein Y-linked family 2 member F, pseudogene

Genomic regions, transcripts, and products

General gene information

Other Names

  • long intergenic non-protein coding RNA 126
  • testis-specific transcript, Y-linked 5 (non-protein coding)
  • transcript Y 5

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_001541.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AF332236
    Related
    ENST00000400581.2

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000024.10 Reference GRCh38.p14 Primary Assembly

    Range
    22296798..22298876 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060948.1 Alternate T2T-CHM13v2.0

    Range
    23123071..23125149
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)