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HUTA_RS11735 fibronectin type III domain-containing protein [ Halorhabdus utahensis DSM 12940 ]

Gene ID: 8384695, updated on 22-Oct-2024

Summary

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Gene symbol
HUTA_RS11735
Gene description
fibronectin type III domain-containing protein
Locus tag
HUTA_RS11735
Gene type
protein coding
Organism
Halorhabdus utahensis DSM 12940 (strain: DSM 12940, culture-collection: DSM:12940, type-material: type strain of Halorhabdus utahensis)
Lineage
Archaea; Methanobacteriati; Methanobacteriota; Stenosarchaea group; Halobacteria; Halobacteriales; Haloarculaceae; Halorhabdus
Old locus tag
Huta_2396
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Genomic context

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Sequence:
NC_013158.1 (2451361..2454513)

NC_013158.1Genomic Context describing neighboring genes Neighboring gene cellulase family glycosylhydrolase Neighboring gene fibronectin type III domain-containing protein Neighboring gene PKD domain-containing protein Neighboring gene fibronectin type III domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_013158.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Tracing the spread of fibronectin type III domains in bacterial glycohydrolases. Little E, et al. J Mol Evol, 1994 Dec. PMID 7528812
  2. Structural design and molecular evolution of a cytokine receptor superfamily. Bazan JF. Proc Natl Acad Sci U S A, 1990 Sep. PMID 2169613, Free PMC Article
  3. Primary structure of human fibronectin: differential splicing may generate at least 10 polypeptides from a single gene. Kornblihtt AR, et al. EMBO J, 1985 Jul. PMID 2992939, Free PMC Article
  4. Complete genome sequence of Halorhabdus utahensis type strain (AX-2). Anderson I, et al. Stand Genomic Sci, 2009 Nov 22. PMID 21304660, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
fibronectin type III domain-containing protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_013158.1 Reference assembly

    Range
    2451361..2454513
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_015790128.1 fibronectin type III domain-containing protein [Halorhabdus utahensis]

    See identical proteins and their annotated locations for WP_015790128.1

    UniProtKB/TrEMBL
    C7NMC3
    Conserved Domains (5) summary
    COG3934
    Location:72 → 410
    COG3934; Endo-1,4-beta-mannosidase [Carbohydrate transport and metabolism]
    cd00063
    Location:805 → 892
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cd00146
    Location:432 → 512
    PKD; polycystic kidney disease I (PKD) domain; similar to other cell-surface modules, with an IG-like fold; domain probably functions as a ligand binding site in protein-protein or protein-carbohydrate interactions; a single instance of the repeat is ...
    pfam00041
    Location:712 → 786
    fn3; Fibronectin type III domain
    cl01397
    Location:529 → 657
    DUF1349; Protein of unknown function (DUF1349)
Nucleotide Protein
Heading Accession and Version

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