U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

TET11 tetraspanin11 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 838433, updated on 18-Sep-2024
Official Symbol
TET11
Official Full Name
tetraspanin11
Primary source
TAIR:AT1G18520
Locus tag
AT1G18520
See related
Araport:AT1G18520
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F15H18.1; F15H18_1; tetraspanin11
Summary
Member of TETRASPANIN family
NEW
Try the new Gene table
Try the new Transcript table
See TET11 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
2
Sequence:
Chromosome: 1; NC_003070.9 (6374906..6376333)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene methylthioalkylmalate synthase-like 4 Neighboring gene tetraspanin Neighboring gene EF hand calcium-binding protein family Neighboring gene Ribosomal protein L6 family protein Neighboring gene ATP binding microtubule motor family protein

Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. A membrane protein/signaling protein interaction network for Arabidopsis version AMPv2. Lalonde S, et al. Front Physiol, 2010. PMID 21423366, Free PMC Article
  2. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
  3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

Products Interactant Other Gene Complex Source Pubs Description

Markers

NM_101710.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in auxin-activated signaling pathway IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in extracellular region ISM
Inferred from Sequence Model
more info
  
Preferred Names
tetraspanin11
NP_564056.1
  • tetraspanin11 (TET11); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: aging; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Tetraspanin (InterPro:IPR018499); BEST Arabidopsis thaliana protein match is: tetraspanin8 (TAIR:AT2G23810.1); Has 423 Blast hits to 421 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 419; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    6374906..6376333
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_101710.3 → NP_564056.1  tetraspanin11 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_564056.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    A0ME76, Q8LAM6, Q9LPR6
    UniProtKB/TrEMBL
    A0A178WFM7
    Conserved Domains (1) summary
    pfam00335
    Location:6 → 262
    Tetraspannin; Tetraspanin family
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9LPR6.1

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools