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AT1G13640 Phosphatidylinositol 3- and 4-kinase family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 837925, updated on 15-Feb-2024

Summary

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Gene symbol
AT1G13640
Gene description
Phosphatidylinositol 3- and 4-kinase family protein
Primary source
Araport:AT1G13640
Locus tag
AT1G13640
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F21F23.8; F21F23_8
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Genomic context

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Location:
chromosome: 1
Exon count:
3
Sequence:
Chromosome: 1; NC_003070.9 (4677004..4679862, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein Neighboring gene root meristem growth factor-like protein Neighboring gene DNA glycosylase superfamily protein Neighboring gene uncharacterized protein Neighboring gene pseudo

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Multi-omics network-based functional annotation of unknown Arabidopsis genes. Depuydt T, et al. Plant J, 2021 Nov. PMID 34562334
  2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_001332079.1
NM_101234.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables 1-phosphatidylinositol 4-kinase activity IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
Phosphatidylinositol 3- and 4-kinase family protein
NP_563930.1
  • Phosphatidylinositol 3- and 4-kinase family protein; FUNCTIONS IN: inositol or phosphatidylinositol kinase activity, phosphotransferase activity, alcohol group as acceptor; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403); BEST Arabidopsis thaliana protein match is: phosphoinositide 4-kinase gamma 7 (TAIR:AT2G03890.1); Has 641 Blast hits to 624 proteins in 172 species: Archae - 0; Bacteria - 6; Metazoa - 171; Fungi - 87; Plants - 282; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    4677004..4679862 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_101234.4 → NP_563930.1  Phosphatidylinositol 3- and 4-kinase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_563930.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8W4R8, Q9LMY3
    UniProtKB/TrEMBL
    A0A178W5T3, A0A654E9F9
    Conserved Domains (2) summary
    cd17039
    Location:40 → 90
    Ubl_ubiquitin_like; ubiquitin-like (Ubl) domain found in ubiquitin and ubiquitin-like Ubl proteins
    pfam00454
    Location:167 → 422
    PI3_PI4_kinase; Phosphatidylinositol 3- and 4-kinase

  2. NM_001332079.1 → NP_001322238.1  Phosphatidylinositol 3- and 4-kinase family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8W4R8, Q9LMY3
    UniProtKB/TrEMBL
    A0A178W5T3, A0A654E9F9
    Conserved Domains (2) summary
    cd17039
    Location:40 → 90
    Ubl_ubiquitin_like; ubiquitin-like (Ubl) domain found in ubiquitin and ubiquitin-like Ubl proteins
    pfam00454
    Location:167 → 422
    PI3_PI4_kinase; Phosphatidylinositol 3- and 4-kinase
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8W4R8.1

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