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F-box/RNI-like superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 836849, updated on 18-Sep-2024
Official Full Name
F-box/RNI-like superfamily protein
Primary source
TAIR:AT5G67140
Locus tag
AT5G67140
See related
Araport:AT5G67140
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
K21H1.10; K21H1_10
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Location:
chromosome: 5
Exon count:
5
Sequence:
Chromosome: 5; NC_003076.8 (26793880..26795369, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene DNA-directed DNA polymerase Neighboring gene basic helix-loop-helix (bHLH) DNA-binding superfamily protein Neighboring gene RING/U-box superfamily protein Neighboring gene PLC-like phosphodiesterases superfamily protein Neighboring gene HXXXD-type acyl-transferase family protein Neighboring gene HXXXD-type acyl-transferase family protein

Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. A comprehensive analysis of interaction and localization of Arabidopsis SKP1-like (ASK) and F-box (FBX) proteins. Kuroda H, et al. PLoS One, 2012. PMID 23166809, Free PMC Article
  2. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
  3. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

Products Interactant Other Gene Complex Source Pubs Description

Homology

NM_126114.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  
Preferred Names
F-box/RNI-like superfamily protein
NP_201515.1
  • F-box/RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box/RNI-like superfamily protein (TAIR:AT1G21410.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    26793880..26795369 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_126114.4 → NP_201515.1  F-box/RNI-like superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_201515.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9FH99
    UniProtKB/TrEMBL
    A0A5S9YII3, A0A654GET8, A0A7G2FN95
    Conserved Domains (3) summary
    cd09293
    Location:58 → 182
    AMN1; Antagonist of mitotic exit network protein 1
    sd00034
    Location:74 → 104
    LRR_AMN1; leucine-rich repeat [structural motif]
    pfam12937
    Location:7 → 43
    F-box-like
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9FH99.1

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