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Rab3 GTPase-activating protein catalytic protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 835964, updated on 18-Sep-2024
Official Full Name
Rab3 GTPase-activating protein catalytic protein
Primary source
TAIR:AT5G58510
Locus tag
AT5G58510
See related
Araport:AT5G58510
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MQJ2.13; MQJ2_13
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Location:
chromosome: 5
Exon count:
22
Sequence:
Chromosome: 5; NC_003076.8 (23648094..23654622, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene tRNA-Ser Neighboring gene LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640) Neighboring gene Protein kinase superfamily protein Neighboring gene Glutaredoxin family protein

Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Arabidopsis TRANSCURVATA1 encodes NUP58, a component of the nucleopore central channel. Ferrández-Ayela A, et al. PLoS One, 2013. PMID 23840761, Free PMC Article
  2. Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. Zybailov B, et al. PLoS One, 2008 Apr 23. PMID 18431481, Free PMC Article
  3. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

Products Interactant Other Gene Complex Source Pubs Description

Homology

NM_001345304.1
NM_125237.4

Gene Ontology Provided by TAIR

Component Evidence Code Pubs
located_in chloroplast HDA PubMed 
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  
Preferred Names
Rab3 GTPase-activating protein catalytic protein
NP_200659.2
  • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G55060.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    23648094..23654622 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_125237.4 → NP_200659.2  Rab3 GTPase-activating protein catalytic protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_200659.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UJD8, A0A654GCC1, Q8RWW8
    Conserved Domains (1) summary
    pfam13890
    Location:568 → 732
    Rab3-GTPase_cat; Rab3 GTPase-activating protein catalytic subunit

  2. NM_001345304.1 → NP_001332207.1  Rab3 GTPase-activating protein catalytic protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8BG94, A0A7G2FH53
Nucleotide Protein
Heading Accession and Version

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