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CRL crumpled leaf [ Arabidopsis thaliana (thale cress) ]

Gene ID: 835175, updated on 11-Oct-2018

Summary

Gene symbol
CRL
Gene description
crumpled leaf
Primary source
Araport:AT5G51020
Locus tag
AT5G51020
Gene type
protein coding
RNA name
crumpled leaf
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
CAA33; constitutive activator of AAA-ATPase; CRUMPLED LEAF; K3K7.20; K3K7_20
Summary
Encodes CRL (CRUMPLED LEAF), a protein localized in the outer envelope membrane of plastids. Mutation in this gene affects the pattern of cell division, cell differentiation and plastid division.

Genomic context

See CRL in Genome Data Viewer
Location:
chromosome: 5
Exon count:
9
Sequence:
Chromosome: 5; NC_003076.8 (20745349..20747305, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene tRNA Neighboring gene F-box and associated interaction domains-containing protein Neighboring gene Rubredoxin-like superfamily protein Neighboring gene NAD(P)-binding Rossmann-fold superfamily protein Neighboring gene succinate dehydrogenase assembly factor

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General gene information

NM_124481.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
lyase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
cell cycle IEA
Inferred from Electronic Annotation
more info
 
cell division IEA
Inferred from Electronic Annotation
more info
 
cellular response to virus IDA
Inferred from Direct Assay
more info
PubMed 
chloroplast fission IMP
Inferred from Mutant Phenotype
more info
PubMed 
defense response IEA
Inferred from Electronic Annotation
more info
 
multicellular organism development IEA
Inferred from Electronic Annotation
more info
 
plastid fission IMP
Inferred from Mutant Phenotype
more info
PubMed 
protein-phycocyanobilin linkage IEA
Inferred from Electronic Annotation
more info
 
regulation of cell division IMP
Inferred from Mutant Phenotype
more info
PubMed 
response to reactive oxygen species IMP
Inferred from Mutant Phenotype
more info
PubMed 
transport of virus in host, tissue to tissue IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
chloroplast outer membrane IDA
Inferred from Direct Assay
more info
PubMed 
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
nucleus ISM
Inferred from Sequence Model
more info
 

General protein information

Preferred Names
crumpled leaf
NP_199915.1
  • CRUMPLED LEAF (CRL); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1001 (InterPro:IPR010404); Has 109 Blast hits to 109 proteins in 37 species: Archae - 0; Bacteria - 64; Metazoa - 0; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    20745349..20747305 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_124481.4NP_199915.1  crumpled leaf [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_199915.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9FI46
    UniProtKB/TrEMBL
    A0A178URF2
    Conserved Domains (1) summary
    pfam06206
    Location:52235
    CpeT; CpeT/CpcT family (DUF1001)
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