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AT5G45670 GDSL-like Lipase/Acylhydrolase superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 834606, updated on 15-Feb-2024

Summary

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Gene symbol
AT5G45670
Gene description
GDSL-like Lipase/Acylhydrolase superfamily protein
Primary source
Araport:AT5G45670
Locus tag
AT5G45670
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MRA19.6; MRA19_6
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Genomic context

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Location:
chromosome: 5
Exon count:
5
Sequence:
Chromosome: 5; NC_003076.8 (18528267..18530501)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene subtilase family protein Neighboring gene adenine phosphoribosyltransferase Neighboring gene FK506-binding protein 13 Neighboring gene histone acetyltransferase (DUF1264)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714
  2. Multi-omics network-based functional annotation of unknown Arabidopsis genes. Depuydt T, et al. Plant J, 2021 Nov. PMID 34562334

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

NM_123934.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables hydrolase activity, acting on ester bonds IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in extracellular region ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
GDSL-like Lipase/Acylhydrolase superfamily protein
NP_199379.1
  • GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT4G18970.1); Has 3607 Blast hits to 3571 proteins in 263 species: Archae - 0; Bacteria - 416; Metazoa - 0; Fungi - 74; Plants - 3097; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    18528267..18530501
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_123934.4 → NP_199379.1  GDSL-like Lipase/Acylhydrolase superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_199379.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8LDT8, Q9FK75
    UniProtKB/TrEMBL
    A0A178UDP5, A0A5S9YBI6
    Conserved Domains (1) summary
    cd01837
    Location:28 → 338
    SGNH_plant_lipase_like; a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its ...
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9FK75.1

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