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Bacterial sec-independent translocation protein mttA/Hcf106 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 832987, updated on 18-Sep-2024

Summary

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Official Full Name
Bacterial sec-independent translocation protein mttA/Hcf106
Primary source
TAIR:AT5G28750
Locus tag
AT5G28750
See related
Araport:AT5G28750
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T32B20.2; T32B20_2
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Genomic context

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Location:
chromosome: 5
Exon count:
2
Sequence:
Chromosome: 5; NC_003076.8 (10783974..10785728, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene nuclease Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein Neighboring gene pseudo Neighboring gene pseudo

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Soluble TatA forms oligomers that interact with membranes: Structure and insertion studies of a versatile protein transporter. Pettersson P, et al. Biochim Biophys Acta Biomembr, 2021 Feb 1. PMID 33279512
  2. Tat subunit stoichiometry in Arabidopsis thaliana challenges the proposed function of TatA as the translocation pore. Jakob M, et al. Biochim Biophys Acta, 2009 Feb. PMID 18930082
  3. New functions of the thylakoid membrane proteome of Arabidopsis thaliana revealed by a simple, fast, and versatile fractionation strategy. Peltier JB, et al. J Biol Chem, 2004 Nov 19. PMID 15322131
  4. Proteomic study of the Arabidopsis thaliana chloroplastic envelope membrane utilizing alternatives to traditional two-dimensional electrophoresis. Froehlich JE, et al. J Proteome Res, 2003 Jul-Aug. PMID 12938931
  5. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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NM_122758.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables protein homodimerization activity IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein transport by the Tat complex IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within protein transport within lipid bilayer IDA
Inferred from Direct Assay
more info
 PubMed 
Component Evidence Code Pubs
part_of TAT protein transport complex IDA
Inferred from Direct Assay
more info
 PubMed 
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
located_in chloroplast envelope HDA PubMed 
located_in chloroplast thylakoid membrane HDA PubMed 
located_in membrane IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
Bacterial sec-independent translocation protein mttA/Hcf106
NP_198227.1
  • Bacterial sec-independent translocation protein mttA/Hcf106; FUNCTIONS IN: protein transporter activity; INVOLVED IN: protein secretion, protein transport; LOCATED IN: chloroplast thylakoid membrane, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bacterial sec-independent translocation protein mttA/Hcf106 (InterPro:IPR003369), Twin-arginine translocation protein TatA/E (InterPro:IPR006312); BEST Arabidopsis thaliana protein match is: Bacterial sec-independent translocation protein mttA/Hcf106 (TAIR:AT5G52440.1); Has 3112 Blast hits to 3112 proteins in 1115 species: Archae - 68; Bacteria - 2578; Metazoa - 0; Fungi - 0; Plants - 106; Viruses - 0; Other Eukaryotes - 360 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    10783974..10785728 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_122758.4 → NP_198227.1  Bacterial sec-independent translocation protein mttA/Hcf106 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9LKU2
    UniProtKB/TrEMBL
    A0A178USC3, A0A5S9Y828
    Conserved Domains (1) summary
    cl00788
    Location:64 → 146
    MttA_Hcf106; mttA/Hcf106 family
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9LKU2.1

Gene LinkOut

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