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hybrid signal transduction histidine kinase M-like protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 832254, updated on 18-Sep-2024
Official Full Name
hybrid signal transduction histidine kinase M-like protein
Primary source
TAIR:AT5G21940
Locus tag
AT5G21940
See related
Araport:AT5G21940
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Location:
chromosome: 5
Exon count:
2
Sequence:
Chromosome: 5; NC_003076.8 (7249014..7250770, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene RNI-like superfamily protein Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene YGGT family protein Neighboring gene uncharacterized protein Neighboring gene miscRNA Neighboring gene alpha/beta-Hydrolases superfamily protein

Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. OXIDATIVE STRESS 3 is a chromatin-associated factor involved in tolerance to heavy metals and oxidative stress. Blanvillain R, et al. Plant J, 2009 Feb. PMID 18980652
  2. Identification of proteins that interact with catalytically active calcium-dependent protein kinases from Arabidopsis. Uno Y, et al. Mol Genet Genomics, 2009 Apr. PMID 19130088
  3. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

Products Interactant Other Gene Complex Source Pubs Description

Homology

NM_147877.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within response to oxidative stress IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within response to zinc ion IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  
Preferred Names
hybrid signal transduction histidine kinase M-like protein
NP_680182.1
  • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G43850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    7249014..7250770 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_147877.4 → NP_680182.1  hybrid signal transduction histidine kinase M-like protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_680182.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8GX89, Q9C593
    UniProtKB/TrEMBL
    A0A178UKY2
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9C593.1

Gene LinkOut

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