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CARAB-AK-LYS Aspartate kinase family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 831255, updated on 7-Sep-2023

Summary

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Gene symbol
CARAB-AK-LYS
Gene description
Aspartate kinase family protein
Primary source
Araport:AT5G14060
Locus tag
AT5G14060
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ASPARTATE KINASE; MUA22.6; MUA22_6
Summary
lysine-sensitive aspartate kinase
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Genomic context

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Location:
chromosome: 5
Exon count:
14
Sequence:
Chromosome: 5; NC_003076.8 (4535367..4539323)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene phosphate transporter 3;1 Neighboring gene Transducin/WD40 repeat-like superfamily protein Neighboring gene ncRNA Neighboring gene Thioredoxin superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Cloning and expression of an Arabidopsis thaliana cDNA encoding a monofunctional aspartate kinase homologous to the lysine-sensitive enzyme of Escherichia coli. Tang G, et al. Plant Mol Biol, 1997 May. PMID 9207844
  2. Allosteric monofunctional aspartate kinases from Arabidopsis. Curien G, et al. FEBS J, 2007 Jan. PMID 17140415
  3. Analysis of Loss-of-Function Mutants in Aspartate Kinase and Homoserine Dehydrogenase Genes Points to Complexity in the Regulation of Aspartate-Derived Amino Acid Contents. Clark TJ, et al. Plant Physiol, 2015 Aug. PMID 26063505, Free PMC Article
  4. AT_CHLORO, a comprehensive chloroplast proteome database with subplastidial localization and curated information on envelope proteins. Ferro M, et al. Mol Cell Proteomics, 2010 Jun. PMID 20061580, Free PMC Article
  5. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

NM_001085112.2
NM_001343314.1
NM_121409.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables aspartate kinase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within aspartate family amino acid biosynthetic process TAS
Traceable Author Statement
more info
 PubMed 
involved_in lysine biosynthetic process via diaminopimelate IEA
Inferred from Electronic Annotation
more info
  
involved_in threonine biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
located_in chloroplast stroma HDA PubMed 

General protein information

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Preferred Names
Aspartate kinase family protein
NP_001078581.1
  • CARAB-AK-LYS; FUNCTIONS IN: amino acid binding, aspartate kinase activity; INVOLVED IN: aspartate family amino acid biosynthetic process; CONTAINS InterPro DOMAIN/s: Aspartate kinase, conserved site (InterPro:IPR018042), Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), Amino acid-binding ACT (InterPro:IPR002912), Aspartate kinase domain (InterPro:IPR001341); BEST Arabidopsis thaliana protein match is: aspartate kinase 3 (TAIR:AT3G02020.1); Has 11053 Blast hits to 11025 proteins in 2540 species: Archae - 202; Bacteria - 7605; Metazoa - 4; Fungi - 146; Plants - 183; Viruses - 0; Other Eukaryotes - 2913 (source: NCBI BLink).
NP_196910.1
  • CARAB-AK-LYS; FUNCTIONS IN: amino acid binding, aspartate kinase activity; INVOLVED IN: aspartate family amino acid biosynthetic process; CONTAINS InterPro DOMAIN/s: Aspartate kinase, conserved site (InterPro:IPR018042), Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), Amino acid-binding ACT (InterPro:IPR002912), Aspartate kinase domain (InterPro:IPR001341); BEST Arabidopsis thaliana protein match is: aspartate kinase 3 (TAIR:AT3G02020.1); Has 11053 Blast hits to 11025 proteins in 2540 species: Archae - 202; Bacteria - 7605; Metazoa - 4; Fungi - 146; Plants - 183; Viruses - 0; Other Eukaryotes - 2913 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    4535367..4539323
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_121409.4 → NP_196910.1  Aspartate kinase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_196910.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O23653, Q9FMU4, Q9FY44
    UniProtKB/TrEMBL
    A0A178UPF4, A0A5S9Y4I6
    Conserved Domains (1) summary
    PLN02551
    Location:31 → 543
    PLN02551; aspartokinase

  2. NM_001085112.2 → NP_001078581.1  Aspartate kinase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001078581.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O23653, Q9FMU4, Q9FY44
    UniProtKB/TrEMBL
    A0A178UPF4, A0A5S9Y4I6
    Conserved Domains (1) summary
    PLN02551
    Location:31 → 543
    PLN02551; aspartokinase

  3. NM_001343314.1 → NP_001330615.1  Aspartate kinase family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8BBD5, A0A5S9Y4I6
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O23653.2

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